Conserved Protein Domain Family
HTH_16

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pfam12645: HTH_16 
Helix-turn-helix domain
This domain appears to be a helix-turn-helix domain suggesting that this might be a transcriptional regulatory protein. Some members of this family are annotated as conjugative transposon domains.
Statistics
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PSSM-Id: 492787
Aligned: 41 rows
Threshold Bit Score: 35.6889
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_002604473   14 FPVISAAANGDTTAMCAILKHYEGYIAKLCTRTLKD-DAgnTYSYVDEEMRNRLQVRLITRTLAFH 78  eubacteria
WP_015893755    4 LTLVKRAQNNDESAMVEIIERFEPKIRKSLRF---------TDISVREDIHQEIVFRMIKAVKSYR 60  Brevibacillus brevis
CDD29704        7 REVLEKAVRGDKVAMEQIFILYKPMIDHASV----------VNGKLDEDFRQEIFLHLVTAIPKFA 62 
CCX91796        7 AAVLQGAVAGRHEDLEQILELYEPLIRKHSL----------HSGTFNEDLHQYLLIHIALNINKFP 62 
13_pfamImport   1 KELLLQAKFGDRTATTELLMLYQPLLLKESI----------IDGILDEDLYQELCIVFMRCIDRFD 56 
WP_015573110    4 DELLYRAKAGDMDAKAEIFAMYRPLLIKYSL----------VNRRFDEDLYQELAVELMKCIRYFR 59  Lachnospiraceae
WP_022388724    5 VGVLCRARMSEREAIQLIVEMYRPLMLKYAN----------LNTGFDDDLYQEFVCCVISCIFKFP 60  Clostridia
WP_012158039    7 REVFNSAKNGDQIAMEKMLKMFRPLIYKNSF----------IDGKFDEDCFQDISIKFISCIKTFE 62  Alkaliphilus oremlandii
WP_014966258    9 EKLVVKAQQGDGVAMSTLISMFYPLIRKNSY----------INGELNEDCVQELTIRLIIAIRRFK 64  Gottschalkia acidurici
WP_006928364    4 QEIVQRAKNGDRAALAQLVNKYSDRIYNLALRILRRkED-------AEDVLQETFLTVIEKLDKFD 62  Caldithrix abyssi
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