Conserved Protein Domain Family
MnmE_helical

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pfam12631: MnmE_helical (This model is not part of the current CDD release)
MnmE helical domain
The tRNA modification GTPase MnmE consists of three domains. An N-terminal domain, a helical domain and a GTPase domain which is nested within the helical domain. This family represents the helical domain.
Statistics
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PSSM-Id: 520372
Aligned: 331 rows
Threshold Bit Score: 268.968
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q55C52          152 LTQVEGLSDLLDASTSFQKKIALKQMQGSISEFYLSLRKDLIRASAYMEAFIDF-GDD------AEldpeivdQSRNRII 224 Dictyosteliu...
jgi:DaAHT2_2558 135 LTRAEAVLDVLNAGTREGLNLAMSQLQGGLQQQLEPVRRALLEVLAVVEVAIDFpDEDaei-idTA-------ALGRRLE 206
Q6APY7          131 LTKAEAVIDVLSAKTRKGVDVAQEQLAGSLYRRIEPIRNALVHMRALFEVAIDFpDQShdi-vdYE-------QIDLQLK 202 Desulfotalea...
O67030          122 LTQAEAVAELISAKTELARKVALKQLHGELSKHIRPLRETLLELLAYVEADIEFaEEDipt-ltKE-------QVIQMVD 193 Aquifex aeol...
WP_012991348    125 LLQAEAVADLIGARTELAVRCALRQLRGELSDRIERIRSQLLELIAYVEADIEFsEQDipt-lsRE-------EILKRLE 196 Thermocrinis...
WP_012964463    125 MTQAEAVADLINAKTDLARKVAIRQLQGELSKYVNSLREKLIQLLAYVEADIEFsEQDipt-isRE-------EILQVLK 196 Hydrogenobac...
CBK40140        144 LAQAEAVLDTIRAKTARSLAIAQSQRRGELSREVEETRSGLVVALAHIEAALDFaEEDiaf-vrQD-------ELLRLLD 215
WP_015423927    127 LSQAEAVNDLIQAQANQAEKAALMQLKGFLSKYLQELLARITELRIRFELAIDFaDQDlp------------lPDSNALY 194 Candidatus C...
WP_013638328    131 LVQAEAINELINATSEVGAKLALKQLEGALSNKIKELRDKLLEVKAYIEAAVDFpDEEiei-feTG-------HIREKIL 202 Desulfurobac...
WP_013182826    126 LSQAEAVQELIGAKNERALDASKQQLQGRLSDKILSFQSQLNSIAAILEAWVDFpD-EglefasFE-------EVCSDLE 197 Waddlia chon...
Q55C52          225 -S----IRDKIQQHLNDGKRGERLRDGANIAIVGPPNAGKSSLINLLTNRKASIVSPIAGTTRDIVEVILDIDGYPVIIG 299 Dictyosteliu...
jgi:DaAHT2_2558 207 lE----VRQPLQELLERADRGRIFREGATVVILGRPNVGKSSLLNALLQDERAIVTAIPGTTRDTIEECLNIHGMPLRIV 282
Q6APY7          203 tE----VIAPVKELLAGVDRGRIYRQGISMVIAGRPNVGKSSLLNAVLQEERALVTSIAGTTRDSIEEMVDILGMPVRIV 278 Desulfotalea...
O67030          194 -K----VIEGINELLKTAKTGKFIREGVKLAIVGRPNVGKSSLFNALLKEERAIVTDIAGTTRDFIEETLQIKGVPVRLV 268 Aquifex aeol...
WP_012991348    197 -D----LIKDLEDLLATARVGNFLRKGLNLAIVGKPNVGKSSLFNALLGSQRAIVTDIPGTTRDFLQEQWNIGGIPINLV 271 Thermocrinis...
WP_012964463    197 -E----VQNSIETLMSTVKAGELLRKGINLAIVGKPNVGKSSLFNALLGRERAIVTEVPGTTRDFLSEELHMEGVPINLI 271 Hydrogenobac...
CBK40140        216 -E----TLIKLRGLVQSGEEGRIWREGAAVAILGRPNVGKSSLMNALLRSDRAIVTPIPGTTRDLLEEVVNIHGIPVRLF 290
WP_015423927    195 -QelldIIKTAEELKSTGEQGRRLREGIKICLTGAPNVGKSSLFNALLQQNRAIVTPHPGTTRDYLEEYLSLNGFPIVIY 273 Candidatus C...
WP_013638328    203 -E----IVEKIEKLVSTYKDGKVLKEGIKVAIVGRPNVGKSSLLNAILKEERAIVTEIPGTTRDIIEETVTLKGIPLRLI 277 Desulfurobac...
WP_013182826    198 -S----VIGEMKELKSTYHDGKILHDGISLCLIGRPNVGKSSLMNALLDKERAIVTDTPGTTRDIVEDSLRINGLNFRLI 272 Waddlia chon...
Q55C52          300 DTAGLR--NsTNDqIEIEGIEMAKDRFNNSDIKLFLFDsfnlfsqlnqnqnlnssfnfneeiknlfnfidnE-------- 369 Dictyosteliu...
jgi:DaAHT2_2558 283 DTAGIRe-T-TEE-VEGIGIERSRRRVAEADLVLLLVE---------------------------------Agsepssed 326
Q6APY7          279 DTAGIRr-Q-AGE-VEALGIQRAKDLINSADLVLFMVD---------------------------------Gsrqldqsd 322 Desulfotalea...
O67030          269 DTAGIRe-T-KDL-VERIGVERSKQKVKEADLILFVID---------------------------------Asqeiteed 312 Aquifex aeol...
WP_012991348    272 DTAGIRt-T-TDP-VEQMGVQRSIEKLGSAHIVLLVVD---------------------------------Gskpleeed 315 Thermocrinis...
WP_012964463    272 DTAGIRe-T-EDV-VESIGVKRSIDSINSADMVLFVVD---------------------------------Askplekdd 315 Hydrogenobac...
CBK40140        291 DTAGIRt-T-DDP-VETEGIRRSHLAWEDADLALILLD---------------------------------Ssqpmlesd 334
WP_015423927    274 DTAGLRefP--DD-IEKEGITKSYELMQESDLILYLVE---------------------------------Attvtnpnl 317 Candidatus C...
WP_013638328    278 DTAGIRe-A-IDK-VEQIGIERTMKSLEEADVILFVID---------------------------------Gsigfteed 321 Desulfurobac...
WP_013182826    273 DTAGIRegA--ET-IEQEGIRRSKEALEKADLVLLVLD---------------------------------Akrgvtaed 316 Waddlia chon...
Q55C52          370 ------------------TIiIFNKSDLLKQFDNlkewenlklnlldnikksnNLNSIQSIEI----------------S 415 Dictyosteliu...
jgi:DaAHT2_2558 327 ma------lfdsvrekkvLV-VVNKLDLLGDASPaaaea---------alaawRHRFPGRELTg--------------iS 376
Q6APY7          323 le------lyediahkpmIA-VINKLDLLAEDGTaaa-------------allDFVPASVPRLa--------------iS 368 Desulfotalea...
O67030          313 lr------iyeeikekdhIV-VANKVDLGIRAN--------------------LEKFKGEKIVk--------------vS 351 Aquifex aeol...
WP_012991348    316 ls------iysmvkdkdhIV-VLNKKDLGVCED---------------------TAKAFPEFVm--------------vS 353 Thermocrinis...
WP_012964463    316 wd------vynlvkqrdhIK-VLNKVDLGLDPS---------------------IAKIFPDGVr--------------vS 353 Hydrogenobac...
CBK40140        335 ll------llrrseaaraLL-VLNKCDLPSRISKed----------------lTRVCPVSAGLfe-------------iS 378
WP_015423927    318 qfsdllspssippdlhskTLvVFSKAD-----------------------------------Lmqentpq--ifpgiycS 360 Candidatus C...
WP_013638328    322 rk------iskvlkkkenVIlVINKKDLGLKLSC-------------------RESIDWKECVe--------------lS 362 Desulfurobac...
WP_013182826    317 eq-------lidlvpkgkTIaVWNKID-----------------------------------LphdeapqlgipyivpiS 354 Waddlia chon...
Q55C52          416 CNN--NenIKDLLNLLKLnLKnL---FEIqdKES-------------PLLTRLRYKQHLSDCVESLdrylY--------Y 469 Dictyosteliu...
jgi:DaAHT2_2558 377 ARArvG--LEQLEDLVFR-LIsGdepRD----PGy------------ACVPNARHRAALARTLPAL----ErvqqglaaG 433
Q6APY7          369 AREgeG--LEALKQAIFT-VVtGsdtPW----DEe------------GCAPNLRHKKSLEATLIAA----ErmvddlaqG 425 Desulfotalea...
O67030          352 ALKgtG--LEELSEEILK-KVgAnleES----VN--------------IYISVRHETLLKKAKEVL----ErfkeefreK 406 Aquifex aeol...
WP_012991348    354 AKTgdG--LEDLRKEILR-RAgFytaEG----GS--------------IYVSARHANLLQNSLSVI----KlvyqqlreQ 408 Thermocrinis...
WP_012964463    354 AKMgdG--MQDLKKVMLE-KLgVfgyEG----MK--------------VYVSARHAQLLKKSLEII----EplihslekQ 408 Hydrogenobac...
CBK40140        379 AKMhiG--LDGLRDAISSrLM-P---RGLe-SREg------------VLVTNLRHAAAFERALQGV----EqarqsvdaG 435
WP_015423927    361 VITenG--LKDLTDAISKrLMlN----T-----Elp---------nkPIIINNRHLVALSKCLQSL----HrakqclkeN 416 Candidatus C...
WP_013638328    363 AKSteG--IDELGEKIVN-LVlLepeTI----LKge----------ePLLTNERHRELLESAKKSL----LkvidsldtG 421 Desulfurobac...
WP_013182826    355 AKEkkG--LKQLHEQI-----------------DrvvwehgppskeeILITNVRHKESLSDAIAAC----EkvleglrsD 411 Waddlia chon...
Q55C52          470 -C-EHDVVlaSEELRSAILSISEITHSVNIDDLLDIIFKDFC 509 Dictyostelium discoideum
jgi:DaAHT2_2558 434 -L-APELL--AVELQACLGSLGEIIGEVGSEELLDTIFSSFC 471
Q6APY7          426 -MgSSDLL--SIDMQECLDQLGDIIGITTTDDVFDVIFSEFC 464 Desulfotalea psychrophila LSv54
O67030          407 -DiSPEIA--MLDLREASDYLGEILGEITTEDLLGKIFSTFC 445 Aquifex aeolicus VF5
WP_012991348    409 -DiSPEIL--MLYLREAVHYLEEVIGTVTTEDVLDSIFSSFC 447 Thermocrinis albus
WP_012964463    409 -DiSPEIL--ALELREALVYLDEMVGAITTEDVLSAIFSRFC 447 Hydrogenobacter thermophilus
CBK40140        436 -R-AGELV--AMDLRIAADALGEITGAITTDEILERIFAEFC 473
WP_015423927    417 qG--YEFI--AFELISASNALEEILGVITTDDLLDKIFSEFC 454 Candidatus Cloacimonas acidaminovorans
WP_013638328    422 -FeSPEFI--SMDIDEALYSLGKIVGQVTTEDMLDIIFSKFC 460 Desulfurobacterium thermolithotrophum
WP_013182826    412 iS--PEFV--AFDMRDCLENLGKVIGTDVTEDILSAIFSKFC 449 Waddlia chondrophila
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