4DQZ


Conserved Protein Domain Family
Hen1_L

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pfam12623: Hen1_L (This model is not part of the current CDD release)
RNA repair, ligase-Pnkp-associating, region of Hen1
This domain is the N-terminal region of the bacterial Hen1 protein. This protein forms stable hetero-tetramer with Pnkp. The hetero-tetramer was able to repair transfer RNAs cleaved by ribotoxins in vitro. This domain provides the ligase activity of the hetero-tetramer.
Statistics
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PSSM-Id: 520366
Aligned: 45 rows
Threshold Bit Score: 331.873
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DQZ_A         1 MILTITYTQPPATDLGYLLHKNPSRPQTFELNHGKAHIFYPEATSERCTVALLLDIDPIDLARGkkGSSG--EGGLFDYV 78  Acetivibrio the...
WP_025227310   1 MLLTITTTHRPATELGYLLRKNPERAQHAELSMGRAHLFYPEATEERCTVAVLVEVDPVALVRGsgPG----GGQFDQYV 76  Fimbriimonas gi...
WP_015185475   1 MLLTITTTYSPATALGYLLHKHPERFQSFDLSFGKASVFYPEASLERCTAALLLDVDPVGLVRKqrGP----GYQLEQYV 76  Allocoleopsis f...
WP_015121924   1 MLLTIATTHQPATDLGYLLHKHPNRCQSFSLPFGEAHVFYPEANEQRCTAALLLDINPVKLVRKr-------TLTLDAYV 73  Rivularia sp. P...
WP_015159843   1 MLLTISTTHQPATDLGYLLFKHPDKCQEFNLSFGTARVFYPEASDTKCTAALVLDINPVDLARGkaGAK---RQTLEAYV 77  Chamaesiphon mi...
WP_015196043   1 MLLTISTTNQPATDLGYLLHKHPNRCQSFPLSFGKAHIFYPEASETLCTAALLLDINPIKLVRGr-------GTTLEHYV 73  Calothrix sp. P...
Q8YQT7         1 MLLTITTTHSPATELGYLLHKHPDRCHSFSLSFGKAHIFYPEASEQKCTVALLLDVDPVKLVRGr-------GATLEQYV 73  Nostoc sp. PCC ...
WP_014398708   1 MLLTLSTTHTPATDLGYLLHKNPERPQSFELPFGLAHVFYPEASASRTTAALLLEVDPVALVRGrpSSGGgqGGPLEQYV 80  Corallococcus c...
WP_014265691   1 MLLTLSTTHKPATDLGFLLHKNPARMQTEELSFGKAHIFYPEASEELCTVALMLEVDSIALARGrhGSSGd-GGPLQPYV 79  Granulicella ma...
Q0ATC0         1 MLLKIATTHQPATDLGFLLRKNPANVHRADLPFGKSVFFYPETSAERCEAALLLEVDPIQLVRGrkTAKG--DGMLAHYV 78  Maricaulis mari...
4DQZ_A        79 NDRPYVSSSFMSVAISRVFGTAMSGKCKEKPELAAIKLPLKAKIMMLPCKGGEEIIYRLFEPLGYKVDVEGYMLDEKFPE 158 Acetivibrio the...
WP_025227310  77 NDRPYVASSFLSSAIAEFFGTAMSGTSKERPELAETPIPLRAEIPVLPARGGERFLKELFKPLGYEVTVERLPLDDQFPE 156 Fimbriimonas gi...
WP_015185475  77 NDRPYVASSFLSVAIAQVFGSALAGRCKDQPELAQTPLPLIAKLSVLSCKSGEAFLGRLFEPLGYTVTAEVQALDEQFPE 156 Allocoleopsis f...
WP_015121924  74 NDRPYVASSFFSVAISQVFGTALGGRCKDKPELVETAIPLVAKISVLPCHGSEGFLRELFEPLGYQVSLQNYPLDETFPD 153 Rivularia sp. P...
WP_015159843  78 SDRPYAASSFLSVAISQVFRTAMTGRCEQKQAVADTPIPLVVKIPVLPSRGREGFLRGLFEPLGYDVSVRRLALDETFPD 157 Chamaesiphon mi...
WP_015196043  74 TDRPYVASSFLSVAMSQVFSTAMGGRCKDKPELVNTPIPLTAKLSVVPCWGGESILRELFEPLGYTVIAENHQLDEKFPE 153 Calothrix sp. P...
Q8YQT7        74 SDRPYVASSFMSVAIAQVFSTALGGRSKDRPELAQTPLPLVAKLSVLPCRGGESFLRELFEPLGYTVSAQGHVLDENFPD 153 Nostoc sp. PCC ...
WP_014398708  81 NDRPYVASSFMSVALSRVFGTALSGRSKDRPELAEQPIPLSARLSVLPCRGGEVFLRRLFEPLGYTVTATRHALDETVPA 160 Corallococcus c...
WP_014265691  80 NDRPYAANSFLSVAIGRMLASALGGRSKDRPELAETAIPLIARIPCVAARGGEDLVRRLFEPLGYAVVLSSALLDERFPD 159 Granulicella ma...
Q0ATC0        79 NDRPYAASSFLSVAISRVLRDAMAGRAKEREDLAATAIPLELEITPLPCKGNDEIVHRLFEPLGYEIETHTALLDEAYPD 158 Maricaulis mari...
4DQZ_A       159 WGKSRYYTVSLEGEVRVRDLLNHIYVLIPVLDSEKHYWVGEDEIDKLFQHGEGWLVDHPEKELITGRYLIRK 230 Acetivibrio thermocellu...
WP_025227310 157 WGESPYYRLVLEGEVKLQDLLKHLYVLIPVLDDRKHYYIGRAEVDKLLLRGGAWLATHPLREEISRRYLKRD 228 Fimbriimonas ginsengisoli
WP_015185475 157 WGNSPYFTVELQGTVRLQDLLSHLYVLIPVLDDEKHYWVGDDEVDKLLRHGEGWLATHPEQQQIAKRYLKRQ 228 Allocoleopsis franciscana
WP_015121924 154 WGESKYFTVELENTLPLSLLLSHLYVLIPVLDNNKHYWVNEEEVEKLLRHGEGWLKEHPLKEEITKRYLKRQ 225 Rivularia sp. PCC 7116
WP_015159843 158 WGNSSYFDVELSHTIKLCDLLSHLHVMIPVLDDDKHYYVNEDEIEKLLRHGEGWLSTHPLKEEITSRYLKRQ 229 Chamaesiphon minutus
WP_015196043 154 WGSSKYYTVELTNTIPLSELLSHLYVLIPVLDDEKHYWVGEDEVEKLLRHGEGWLNTHPAKEKITRRYLKYR 225 Calothrix sp. PCC 6303
Q8YQT7       154 WGNSRYFTVELQHTIPLSDLLSHLYVLIPVLDDEKHYWVNEEEIEKLLRHGEGWLSQHPAREQITRRYLKRQ 225 Nostoc sp. PCC 7120
WP_014398708 161 WGDSRYFTVTLEGQVRLGDLLSHLYVLIPVLDDDKHYWVGDEEVEKLLRHGEGWLATHPEREQIARRYLRHR 232 Corallococcus coralloides
WP_014265691 160 WGTSPYVSLELSATVRLQDLLTHLYVLIPVLDNEKHYWVGDDEVEKLLKRGEGWLPSHPEKDLIVSRYLKRQ 231 Granulicella mallensis
Q0ATC0       159 WGESPYRTVRLKATKRLADALTHLYVLIPVLDNAKHYWVGSDEVEKLIDKAGDWLQSHPERDLIANRYLRKR 230 Maricaulis maris MCS10
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