7EEI


Conserved Protein Domain Family
L_PA-C-like

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pfam12603: L_PA-C-like (This model is not part of the current CDD release)
RNA-directed RNA polymerase L, PA-C-like domain
This domain is found in RNA-directed RNA polymerase L from from Bunyavirales. It has been described as the PA-C-like domain which forms a narrow and positively charged cleft with the thumb domain, where the 3' RNA is likely bound. It is found in association with pfam04196.
Statistics
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PSSM-Id: 520354
Aligned: 4 rows
Threshold Bit Score: 256.073
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7EEI_A    5 RELLAMVSSIQINWSVTESVFPPFSREMFDRFRS--SPPDSEYITR---IVSRCLINSQEK-------LINSSFFAEGND 72   Rift Valley fever v...
P27316  220 RELPAMVSSIQINWSVTESVFPPFSREMFDRFRS--SPPDSEYITR---IVSRCLINSQEK-------LINSSFFAEGND 287  Rift valley fever v...
Q85431  682 YRIKEMFRESFPN----NKFIHPITKEMYEHFVNpmISGEKDYVANlksIIDKETRDEQRKnleslkvVDGKKYTERKAE 757  Rice stripe virus (...
P33453  220 REVKAAFHSVQPDWNVTEANFAPFSRRMFSNFAQ--MEPDKEYLAH---IILDSLKQAQAD-------LDGNHYLNESLT 287  Uukuniemi virus S23
7EEI_A   73 KALRFSKNAEEcSLAVERALNQYRAEDNLRDLNDHSSTIQLPPWLSYHDVDGKDLC------PLQGLDV--RGDHPMCNL 144  Rift Valley fever v...
P27316  288 KALRFSKNAEEcSLAVERALNQYRAEDNLRDLNDHKSTIQLPPWLSYHDVDGKDLC------PLQGLDV--RGDHPMCNL 359  Rift valley fever v...
Q85431  758 TALNEMSQAEE-------HYRSYFENDNFRST--LKAPVQLPLIIPDVSSQDNQFSnkelsdRIRKKPI----DHPIYNI 824  Rice stripe virus (...
P33453  288 EQARLDRNREE-SLNMVKDFERDFNNAAQRSAWSHKSTVPFPGVIPKVSGDTTSLS------RLVELPVitGGSDATIRA 360  Uukuniemi virus S23
7EEI_A  145 WREVVTSANLE---------EIERMHDDAAAELEFALsGV------KDRPDERNRYHRVHLNMGSDDSVYIAALGVN 206  Rift Valley fever virus
P27316  360 WREVVTSANLE---------EIERMHDDAAAELEFAF-GS------KGQARERNRYHRVHLNMGSDVLVYIAALGVN 420  Rift valley fever viru...
Q85431  825 WDQAVNKRNCSialghldelEISMLEGQVAKKVE------------ESYKKDRSQYNRTTLLTNMKEDIYLAERGIN 889  Rice stripe virus (iso...
P33453  361 WRSAYGSVSNG---------TVERCDEDVERERRAAL-CSltveelEESKALRMKYHRCKIDNGMMDKLDLAMQGVE 427  Uukuniemi virus S23
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