Conserved Protein Domain Family
ERbeta_N

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pfam12497: ERbeta_N (This model is not part of the current CDD release)
Estrogen receptor beta
This domain family is found in eukaryotes, and is approximately 110 amino acids in length. The family is found in association with pfam00104, pfam00105. There is a conserved IPS sequence motif. There are two completely conserved residues (Y and W) that may be functionally important. ERbeta binds estrogens with an affinity similar to that of ERalpha, and activates expression of reporter genes containing estrogen response elements in an estrogen-dependent manner. ERbeta acts as a transcription factor once bound to its ligand and it can dimerize with ERalpha.
Statistics
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PSSM-Id: 520301
Aligned: 14 rows
Threshold Bit Score: 147.626
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007659411  36 CPAPYGCGRSSGPPEHSPLYIPPPYSESHHGCSTTAFYSPIVMSFNTASsgsDLDGGTVRPAASPGISWPTPGHVSP-LP 114
Q9XSW2        12 SPVSYNCSQSVLPLEPGPIYIPSSYVESCHEYSAMTFYSPAVVNYSISS---NSEVGPGRQATSPNVLWPTPGHLSP-LA 87  pig
XP_017204881  31 SPASYNCSQSVLPLEHGPLYVPASYVENHHEYPAMTFYSPAMMNYSVPSgasEADRGPGRQPTSPDVLWPTPGHLSP-LA 109
NP_001296408  32 SPASYNCSQSILPLEHRPICIPSSYVESHHEYSAMTFYSPAVMNYSIPSsanSSEGGPGQQTTSPNVLWPTPGHLSP-VA 110
XP_002200631  36 SPVPYNCNQSTLTAEHSPLYIPSSFMENRHEYSTMAFCSPAMVNYNIGSnfgDAEGVTARQTSSPSALWAAPGHLSP-LS 114
CCP19149      36 SPVPYSGNLSTLPVEPRKICITSPYLENRHDFTTMAFYSPAILGYNVPAgvgESDNMAVSQSLSPTMLWPPAGHISP-MA 114
XP_006632252  33 TPAHYSSALPALAVERHPVCIPSPYMERSHDYTAVAFYSPTLLGYNGHSngsLPESPTVRQSLSPSMFWPAPSHVSS-LA 111
Q9YH32        28 SPILGSSSPGLSHETSQPICIRSPYTDLGHDFTTIPFYSPTIFSYGGPS---ISECSSVHQSLSASLFWPSHGRVGTpIT 104 Nile tilapia
XP_001377837  36 SPAPYNCSQAVLPLEHSPLYIPSSYVEGRHEYSAMAFYSPTVMNYSIPSnanDSEGGAVRQTTSPNILWPTPGHLSP-IT 114 gray short-tail...
Q95171        12 SPSSYNFGQSILPLEHGPIYIPSSYVESHHEYPAMTFYSPAVMNYSIPSsvtNLEEGPGRQITSPNMLWSTPGHLSP-LA 90  white-tufted-ea...
XP_007659411 115 LHC-PSSLIYAESQRSSWCEARLTEPVLPlPKLEMLK 150
Q9XSW2        88 IHC-QPSLLYAEPQKSPWCDTRSLEHTLP-VNRETLK 122 pig
XP_017204881 110 IRC-QSSLLYPEPQKPSWCEVRPLEHTSP-VNREALK 144
NP_001296408 111 IRH-PSSLLYTETQKSPWCEARSLEHALS-VNRESLK 145
XP_002200631 115 LHC-QSSLLYPEQPKSLWCEARPMEPVLP-GSRETLK 149
CCP19149     115 LHC-QPSLMYAEPSKDPWSEDRLIEQNLSlNSRGSLK 150
XP_006632252 112 IHC-QQSLMYSEPPRSPWSEPQPREPVMVeNSKLSVR 147
Q9YH32       105 LHCpQGRSQQGQSAQTPWDSVIT-------TSKSVRR 134 Nile tilapia
XP_001377837 115 LHC-QSSLLYAEPQKGPWCEARSVEHVLP-GNKETLK 149 gray short-tailed opossum
Q95171        91 VHH-QLSHLYAEPQKSPWCEARSLEHTLP-VSRETLK 125 white-tufted-ear marmoset
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