9E9R


Conserved Protein Domain Family
ApoB100_C
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pfam12491: ApoB100_C (This model is not part of the current CDD release)
Apolipoprotein B100 C terminal
This domain family is found in eukaryotes, and is approximately 60 amino acids in length. There are two conserved sequence motifs: QLS and LIDL. ApoB100 has an essential role in the assembly and secretion of triglyceride-rich lipoproteins and lipids transport.
Links
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Statistics
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PSSM-Id: 520298
Aligned: 13 rows
Threshold Bit Score: 67.4682
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
9E9R_A       4494 QFRYKLQDFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITELLKKLQSTTVMNP 4550 human
XP_003270616 4490 QFRYKLQDFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYIMELLKKLQSTTVMNP 4546
XP_014313855 4486 QFKDILQNFSDRLFDYYEKFIAESQILIDLSIQTYHMFLIYITGLLKELQSTTVYDl 4542
3_pfamImport    1 QFRYKLQDFSDQFWDYYEKFIAESGRLIDLSIQKYHMFLRYITELLKKLQSATASDI 57  
1_pfamImport    1 QVKEKLQEAYEHLS--YERFITNTKKLIDLVIENYAAFFQDLQQLLHQFEEAAADT- 54  
6_pfamImport    1 QLKEKLREIYGQISQSQEKLISEAKRLIDLTIENYSAFLQYLSELLRWLEQVTAESI 57  
7_pfamImport    1 QVKAKLQEIYEQLSDSQEKLIGEAKKLIDLTIEKYSALLQYISELLRWLEQVTADSI 57  
P11682        291 QVKAKLQEIYGQLSDSQEKLINVAKMLIDLTVEKYSTFMKYIFELLRWFEQATADSI 347  chicken
5_pfamImport    1 QFTSKLQELSDQFSDYHEKVIALFQGLIDLSIENYHMLLRYITEVLAKLQAATAK-- 55  
4_pfamImport    1 QFISKLQEFLDQFPDYYEKFIAESQRLIDLAIQSYHVILSYITELLKKLQAATAS-- 55  
Q7TMA5       4402 QLHSKLQDFSDQLSGYYEKFVAESTRLIDLSIQNYHMFLRYIAELLKKLQVATANNG 4458 Norway rat
2_pfamImport    1 QFSFKLQDFSVQLSEYFEKFLAESTRLIDLSIQSYHVFLRYITELLKELQVATTNNV 57  
XP_008253005 4500 QFRYKLQDLSDQLCDYPEKLVAESKRLIDLSIQSYHMFLRYVTELLKELQLAAVNDM 4556
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