6SIC


Conserved Protein Domain Family
Cmr2_N
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pfam12469: Cmr2_N (This model is not part of the current CDD release)
CRISPR-associated protein Cmr2, N-terminal
This domain family is typically between 101 and 138 amino acids in length and it is found in subunit Crm2 of the CRISPR RNA-Cas protein complex (Cmr complex).
Links
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Statistics
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PSSM-Id: 520287
Aligned: 47 rows
Threshold Bit Score: 85.3731
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
6SIC_K        202 LLGIDTIGVADFISKGRKTRDLWISSYLVSALLWYVITWFIEEYGPD------VILFPSLRFN------QFYAFYLL--- 266  Saccharolobus...
Q8R6Z3        197 FLLFTIGPVQSFIATARKTSDLWAGSYMLSYFIWKIMKFVVERYGAD------VIVYPNLLGQ------PLVDLWLS--- 261  Caldanaerobac...
WP_014434576  187 mLQMSVGPVQTFIFEARRTQDLWMGSYLLSYLAWTGIKVIAESYGPD------AVLYPSLRGH------PWMDRWL---- 250  Caldilinea ae...
WP_012238308  268 LLAFSLGPVQRFIAQSRTSTDLWTSSMLLSDLVWHAMVPFVERYGPE------AIVYPDLRAN------PRADVWLW--- 332  Sorangium cel...
WP_015758425    5 ILHFTLGPVQSFVAQARRTRDLWAGSFILSYLAGQAMYLVHRAGGK--------IIFPAVYDNngiindPLLNVIADkne 76   Desulfofarcim...
WP_012875888    4 VLQFSFSPVQEFVAEARKTADLRTGSFLISYLSVRAAHAAIEQAREDgdpdaeGRLFPDITND------PIYRRLSG--- 74   Thermobaculum...
WP_012826484    4 kLHLSLGPVQAFIAESRRTRDLWVGSYLLSYLAGRALYAAAQHG---------EIVLPRVHDDvlalyaPGRTDRAR--- 71   Haliangium oc...
4_pfamImport    1 LITVSLGPVQGMIAAARRTRDLWCGSWVLSEAARAAALVLHNADAKn-----kPLIFPYTEN-------PDSDLKPK--- 65  
WP_013659865    5 LITIAIGPVQSLIEAARRTRDLWTGSWVLSECAKAAAKSLHDNQANLpntgssCLIFPSPES-------PETELLPS--- 74   Marinomonas m...
WP_013769060    4 YTGITIGPIDRTIENARFTRELWASSYFFSYLMHQLALKLSALS--DcqvilpYLDRPAPDDAplveagPPVEAEPM--- 78   Haliscomenoba...

6SIC_K        267 -E-----------------------------KLRKEgvsedvideikelitkyifngddlfenlkiPPYPIIPGRITLIL 316  Saccharolobus...
Q8R6Z3        262 -SevfgnslthlsqkefdewfkewnniprskGLEEK------------------------------LTIANMPNRFLAIA 310  Caldanaerobac...
WP_014434576  251 -Qkelgt--------------------ppssvFTGD------------------------------ITIAATPNKFVALV 279  Caldilinea ae...
WP_012238308  333 -Eqangadgaappa------haaryqdvlpeQLNPC------------------------------SYAGIFPNTFIALV 375  Sorangium cel...
WP_015758425   77 gK-----------------------------PISKK------------------------------PVAGTLPNRFKAEI 97   Desulfofarcim...
WP_012875888   75 -------------------------------QSQDQ------------------------------PDTGSFPNQFSLSV 93   Thermobaculum...
WP_012826484   72 -----------------------------------L------------------------------PAHASLPNRFVLEC 86   Haliangium oc...
4_pfamImport   66 -E-----------------------------KLGDE---------------------------------ANIANILRAQI 82  
WP_013659865   75 -D-----------------------------FNDQY---------------------------------ANISNVIRAEI 91   Marinomonas m...
WP_013769060   79 -A---------------------------------K------------------------------TGAGLYPDRIILHH 94   Haliscomenoba...

6SIC_K        317 PgLi-------rEGEEykkvqddncfisK-------VKERYNEGWRKLIE 352  Saccharolobus islandicus REY15A
Q8R6Z3        311 P-Ineg---ealKLGE------------E-------CEKNFKEQLKSLAK 337  Caldanaerobacter subterraneus subsp. tengco...
WP_014434576  280 P-Aqe-----vnDLAG------------A-------VAQAIRNTWREIAE 304  Caldilinea aerophila
WP_012238308  376 PlGgeryltllkDLAG------------E-------ARRAVLGRWRQLAD 406  Sorangium cellulosum
WP_015758425   98 PgEfkp----------------------------veCRQAVISAWREIAG 119  Desulfofarcimen acetoxidans
WP_012875888   94 PdEqt-----arRWAE------------A-------AQGELQKAWEEIAS 119  Thermobaculum terrenum
WP_012826484   87 AdQaa-----avQAAE------------A-------ATSALRAAWAHIAG 112  Haliangium ochraceum
4_pfamImport   83 ElSs----------PG------------AaaklckkAKDAANQRIQDL-- 108 
WP_013659865   92 QaEe----------TD------------DikviaeqAKQAAKNRLTAIAE 119  Marinomonas mediterranea
WP_013769060   95 TgAapd---------------------------iqsIRNAAKEVIKGVAA 117  Haliscomenobacter hydrossis
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