Conserved Protein Domain Family

pfam12468: TTSSLRR 
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Type III secretion system leucine rich repeat protein
This domain family is found in bacteria, and is approximately 50 amino acids in length. There are two completely conserved residues (Y and W) that may be functionally important. This family consists of leucine-rich repeat proteins involved in type III secretion.
PSSM-Id: 403610
View PSSM: pfam12468
Aligned: 15 rows
Threshold Bit Score: 55.219
Threshold Setting Gi: 81853756
Created: 21-May-2020
Updated: 7-Aug-2020
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
1JL5_A     8 VSNTFLQEPLRHSSNLTempve-----------------aenvKSKTEYYNAWSEWERNAPPgnGEQREMAVS 63  Yersinia pestis
Q32F09     7 INNNFSLSQNSFYNTIS--------------------------GTYADYFSAWDKWEKQALP--GENRNEAVS 51  Shigella dysenteriae Sd197
Q32D09     4 INMLRNISSCLFPHISTi-------------------------TSPNHYLSEWDDWEKQGLP--EEQRTEAVR 49  Shigella dysenteriae Sd197
Q32F07     4 TNNNHRLISNSFSTYSIdt-----------------------sCAYENYLTHWTEWKNNRIQ--EEQRDIAFQ 51  Shigella dysenteriae Sd197
Q327F7     4 VNNTHSSVSCSPSINSNl-------------------------TSNEHYLRILTEWEKNSSP--GEERGIAFN 49  Shigella dysenteriae Sd197
Q327F0    14 IQAIGSGIMHQINNIYSltpfss--------------pmeltpSCNEFYLKAWSEWEKNGTP--GEQRNIAFN 70  Shigella dysenteriae Sd197
ACR68523 102 VTIDADTYTVVYPDGEIthdlsqpapqgaegllissasatagpQTEDEYEAAWAEWVRAAPPaeTADRANTVQ 174 Edwardsiella ictaluri 93-146
Q327F8     4 INNHSFFRSLCGLSCISrlsve--------------------eqctRDYHRIWDDWAREGTT--TENRIQAVR 54  Shigella dysenteriae Sd197
Q32I41     4 AHNPSFFRSFCGLGCIShlsve--------------------eqniTDYHRIWDNWAKEGAA--TEDRTQAVR 54  Shigella dysenteriae Sd197
ACR68525 110 VTIDADTYTVVYPGGEIthdlslpasqgdegllasgasttagpQTEEEYKAAWSAWERAAQPeeAADRAQTVL 182 Edwardsiella ictaluri 93-146
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