Conserved Protein Domain Family
Helicase_IV_N

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pfam12462: Helicase_IV_N 
DNA helicase IV / RNA helicase N terminal
This domain family is found in bacteria, and is approximately 170 amino acids in length. This family is found in bacterial DNA helicase IV, at the N-terminus of pfam00580.
Statistics
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PSSM-Id: 492642
Aligned: 16 rows
Threshold Bit Score: 138.59
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9KLM6        13 MQLNANKTAQFFIANEYYQVQLEKE--WLVLTSLSSEERIPFHVWNgEVQIRRGVFWGTLQFFAHPeegvQRSWLVQGLP 90  Vibrio cholerae
P15038         1 MELKATTLGKRLAQHPYDRAVILNA--GIKVSGDRHEYLIPFNQLL-AIHCKRGLVWGELEFVLPD----EKVVRLHGTE 73  Escherichia col...
Q8ZQ65         1 MELKATSLGKRLAQHPYDRAEILNA--GVKVSGDRHEYLIPFNQLL-AIHCKRGLVWGELEFVLPE----DKVVRLHGTE 73  Salmonella ente...
WP_013025282   1 MELKATSMGKRLAQHPYNRVRLLTA--GVEVSGDKHEYLIPFNQLS-DITCKRGMVWGELEFLLAD----NKVVRLHGTE 73  Pantoea
3_pfamImport   1 MQVTASRSAKFLIQSEYNEVCIEGD--KLILNSAQSEEHIPFSVWDgSITLKRGLMWGSLVFHAHAknnkQQAWLVQGLP 78 
Q87ID4         1 MQLTATSKAQFFIQNEYYHVEIKEN--SVLLSSIGSEEHIPFTVWNgKVNVKRGLFWSSLQFFAHEqdgkQQSWLVQGLP 78  Vibrio parahaem...
Q6LST7         1 MRLSASVLAQWFVQGDYFSIELNEH--SLTLDSQTETSTISFDDWDgAIEVHRGVVWGSLELTSADq---QYCWTIHGLP 75  Photobacterium ...
Q5E4C9         1 MQIKATPFAQWLVQGDFYQLELEQE--QLLFTSHKYQVSVPFDKWSgKVTFERGLIWGALCFYNRNe---QVAWRVSGLP 75  Aliivibrio fisc...
WP_011798393   3 qSWGPSGPGKLFTNSPAWNLTLDGEqfALEVRGKAQTGSVLLLE---SLAIEPGTFWTALHFPSKN----GKRQSLDGIP 75  Polaromonas nap...
1_pfamImport   1 MELKSTQMGQTLARHPYNRVRLLNA--GIEVSGAKHRYVIPFNELI-NIQCKRGIVWGELEFELPD----EQVVRLHGTQ 73 
Q9KLM6        91 WPECRHFAHQLVAHYQA-----------------------WHNRQCEQLSLYFPRWQQELSRLKRLP---------SFLS 138 Vibrio cholerae
P15038        74 WGETQRFYHHLDAHWRR-----------------------WSGEMSEIASGVLRQQLDLIATRTGEN---------KWLT 121 Escherichia col...
Q8ZQ65        74 WSETQQFHRYLDAHWRR-----------------------WSQEMSDVAAQALQEQWARISERTGGN---------QWLT 121 Salmonella ente...
WP_013025282  74 WQETQRFYHYLMQAWQD-----------------------WSHEMSDVCASVLQGLRAEINGFSEQD---------RWLK 121 Pantoea
3_pfamImport  79 WEDCNRFVKQAQHEYSS-----------------------WHYNQCKSLNEKLPSWQETLDLMRSQP---------AYLP 126
Q87ID4        79 WPQCRKFALEAVRQYQD-----------------------WHNTQCRKLAEYLPKWEEELYQLKHLP---------AYLS 126 Vibrio parahaem...
Q6LST7        76 WQQCKPFAARLLESYRD-----------------------WAHGRVDRLDKALPDVLNRINSFATQQ---------GYLR 123 Photobacterium ...
Q5E4C9        76 WEECDAIINAVLNAYAD-----------------------WKESKVLLLNQLQPQMIELIENFSANK---------RFLK 123 Aliivibrio fisc...
WP_011798393  76 NEEAASLRQTLFSTIEQirhrervqallkdfntvtapvltWAKQAVQAAKDQLQKKGWLTHEFVQRQnegkptglsKYLS 155 Polaromonas nap...
1_pfamImport  74 WQETQEFYQYLTDIWSR-----------------------WSEEMSVVSAGVLDKQVSEIKSVIQAD---------RWLT 121
Q9KLM6       139 HSSVEAWVAQVYADLKLMDMTLHEAQKHLP--TVFDTLLPWLL 179 Vibrio cholerae
P15038       122 REQTSGVQQQIRQALSALPLPVNRLEEFDNcrEAWRKCQAWLK 164 Escherichia coli K-12
Q8ZQ65       122 RERVRGLEHEIRQTFAALPLPVSRLEEFAHcrEIWRKCLAWLQ 164 Salmonella enterica subsp. enterica serovar Typhimurium
WP_013025282 122 RSELQAINDQILKQFDALPLPLSRINDFEScrENWAFCQHWLQ 164 Pantoea
3_pfamImport 127 TSQLNNWKNAVSEDFASLNMSLEEAQQRMP--DAMTSVSDWL- 166
Q87ID4       127 HSQVMAWVEKLNQELAEIKTSLDEAKMRMP--NRMGEIEPWLV 167 Vibrio parahaemolyticus
Q6LST7       124 ESEHDNLCKFLDDSLKTTGLTPELAASFRP--MAFERIEPWLE 164 Photobacterium profundum
Q5E4C9       124 QTEALMMVEKLYDLFEQTKISIPLAEQLQP--DCIAPVIDWLT 164 Aliivibrio fischeri ES114
WP_011798393 156 TPEVANHVEKQSAQFHA-------------------DLKFWKH 179 Polaromonas naphthalenivorans
1_pfamImport 122 QPESQKLRDNILHAFAALPLPRARLAGFDNcaQSYQFCLDWLS 164
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