Conserved Protein Domain Family
DUF3686

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pfam12458: DUF3686 (This model is not part of the current CDD release)
ATPase involved in DNA repair
This domain family is found in bacteria, and is approximately 450 amino acids in length. There are two conserved sequence motifs: DVF and SPNGED.
Statistics
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PSSM-Id: 492638
Aligned: 24 rows
Threshold Bit Score: 627.758
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012888323   33 ELARQAGALNTRRLEVFGGAELRLIGTERIRTENNCVPRDIVALGGVagppagagggtggrqglILFGYNVFMGLKPETA 112  Streptosporan...
WP_014438253   27 ELRERLEALNAKRKEAFGSVELALAGTSRVTTAHACVPRDIVAVGDR-----------------VLMGFNVHFGLKSTVD 89   Phycisphaera ...
Q7UPX3         51 DLRDRLAKLNEDRGEVFGNIETRLIATQRVTTEHNCVPRDIVSIGDE-----------------FLFGYNVQFGLKTEIE 113  Pirellula sp.
WP_015693615   36 ELRGRLDELNVARKEVFGAIELELKGNSRINTENNCVARDIIAVGDF-----------------CIFGYNVQMGLRSEIK 98   Saprospira gr...
WP_013452183   23 nLVEKLQKLNKERQNIFGAVEFKLLSNVRIKTEHNCLARDIISIGNI-----------------CLFGYNVRLGLKSILE 85   Marivirga tra...
WP_014937349   24 hLSHKLAALNEDRKKVFGGIDFSLIANERISTEQSCKIKDLFAVNHL-----------------CIVGYNTHLGLKTEVE 86   Riemerella an...
4_pfamImport    1 -LRQSTEALNEQRLQEFGSSQMEVIGRVRIRTENNCIARDIVQVGDW-----------------LLFGYNVFMGLKKETS 62  
1_pfamImport    1 -LETLARQLNEERLEEFGRSQMEVIGRMRVRTENNCLGRDIAQVGGY-----------------LLFGYNVFMGLKQSTR 62  
Q21F00         35 kLEEATRQINQARLDEFGSSEMTVAARVRVRTENNCIARDIVQVGKY-----------------LLFGYNVFIGLKKETL 97   Saccharophagu...
WP_015047632   36 kLKGFADTLNSARTSEFGSTEMQVLARTRVRTENNSIARDMVQVGPY-----------------LLFGYNVFIGLKKEVR 98   Simiduia agar...
WP_012888323  113 VEDVFSMHTFVRgatgaqggpeGAAFRFDPAP----LF---RHPQFERDFAELYRYYRETRLLRLRRTEG--KMLAVFRT 183  Streptosporan...
WP_014438253   90 LGDVFACYRQDD----------EAVFHDdg----lgLL---ENESFRKDFTDLMRFYKDARFTKFFRRGP--HVYMKFRT 150  Phycisphaera ...
Q7UPX3        114 LADVFSIYRME-----------STEFHErp----lqRI---MDDRFVSDFHELYRFYKDTTFLRFFVSGP--ILHMVFQV 173  Pirellula sp.
WP_015693615   99 LEDIFSAYKFN-----------GDRFEEsd----lsPLfegQNRQFLTDFSNLFRYYKDAVFAKFAIEQNspFFYMVFQL 163  Saprospira gr...
WP_013452183   86 IDDVFSVFKFE-----------NDEFHPis----sdII---KDDTFSEELQNLYKFYRNTQFSRFFKKGS--FLYLVFQL 145  Marivirga tra...
WP_014937349   87 VTDVFALYAFQ-----------ENRFEPqp----itFL---DDANFVQEFKNLYKYYRNTQFVRFYYTQN--YLYFVFQL 146  Riemerella an...
4_pfamImport   63 VADVFSLYRLVEg---------SEGYEAEAVAldgtFL---SQSGFVNDFNELYTYYKNTRLLQLAIRDG--KLLASFQI 128 
1_pfamImport   63 VEDVFVLYRLHEg---------EQGYEVTPVDlkdsFL---GIQSFVQDFQELYAYYKNTRLMQLAVRDG--KLLASFQI 128 
Q21F00         98 VEDVFALFSLTGe---------GDALELHEQSkegtFL---ADTRFKQDFSELYRYYKATKLVELTVKDG--KLLMGFQI 163  Saccharophagu...
WP_015047632   99 VEDVFELYRLQQt---------GDDITLEPQAkdntFL---ADRGFVSDFEELYRYYKHTRLVELSVKNG--KLLAGFQI 164  Simiduia agar...
WP_012888323  184 GPQ--DTRVLRWQV-------GADGTL-TYIDDRGERDHAFPPSHDFEWTPTTRDDHVLGRHPHISIQGEVFVETVGGDL 253  Streptosporan...
WP_014438253  151 GRTvdDFKAFKWAFapgesgqEGEGL--AYLGNRSDHEVTYPPQHDFAWKRVTRDMQTGGRFPHYSIEDLVFVETTGGDL 228  Phycisphaera ...
Q7UPX3        174 GKTarDIKSFKWRR-------SPDGL--QYVDNRSDHEVRLPDQHEFRWQRTTRDMHHYGEHPHISIDDRVFVETVGGDL 244  Pirellula sp.
WP_015693615  164 SEDvnDSKMFKWEV-------RDGQL--LYFNQPGEHRYTFPAQHEFEWKKVSREMYRYGDHPHISILDRVFVETVGGDL 234  Saprospira gr...
WP_013452183  146 SESptDIKAFKWLI-------EDEKL--TFVDSRSAAEVQFPAQHEFEWTKATRDMQRTGKNPHISIVDKVFVETVNGNL 216  Marivirga tra...
WP_014937349  147 SANasDIKAFKWLI-------KDNEL--HFIDSRSASEVKYPPQHEFQWVKATRDMHRTGRHPHISLADKVFVEAIGGDI 217  Riemerella an...
4_pfamImport  129 GERitDIRVFRWSL-------SLDGKDvRYIDNRGERDIALPAPFDFEWQKTTREMTVNGRHPHLNILDTVFVETVGGDL 201 
1_pfamImport  129 GERlsDVRVFRWSV-------PVDGQPiRYIDNRGERDIELPAPHDFEWQRAGREQLVQGRHPHINILDKVFVETLGGDL 201 
Q21F00        164 GERleDIRVFRWAV-------SATGDTvEYIDNRGERDIQLPPAYDFEWTQCTREDTVHGRHPHVNILDKVFVETVGGDL 236  Saccharophagu...
WP_015047632  165 GEKldDIRVFRWAL-------SADQKTlTYMDNRGERDIQLPPAYDFEWVRTTREHSVHGKHPHVNIEDTVFVETVGGDL 237  Simiduia agar...
WP_012888323  254 TIKIENNTETGEGVYREPVAEPLQSLADADVQHARVGPLILLRVRPYNETEWRHLVFNTRTKGVVRLDGIGQACHRLPED 333  Streptosporan...
WP_014438253  229 TIKVENNTETGEGILAEPVDEPDQGLDDADVLYVVEGPLVLLRIRPYREKAWRHFVFNTKLGTAVRADGLGTAAVLLPED 308  Phycisphaera ...
Q7UPX3        245 TIKVENNTSVGEGIYAEPVDNFDQKLDDAEIHYAIVGHLVLLKIKPYQENQFRYIIFNGKINQAIRLDEIQHACVMLPGD 324  Pirellula sp.
WP_015693615  235 TIKVEDNTADGQGVYREEVAQKDQKLEDADIQFADLGNLIVLSMAPYLEEA-RYFVFNEKLQSVERIDTLEHSGILLPGS 313  Saprospira gr...
WP_013452183  217 TIKIEDNTDDGEGIYSEDVEQRDQSLDDAEVSYCDLGNLVLLKIKPYLESN-RYFIFNYRVKKVVRVDTLEDAGILLPDE 295  Marivirga tra...
WP_014937349  218 TIKVEDNTQTGKGIYSEPVAHKDQTLDDAEIHFFDYDNLVLFKIKPYQEDE-RYFIYNHKEKKVKRVDSLKHSAILLPEN 296  Riemerella an...
4_pfamImport  202 TIKVENNTESGQGIYREEVMDKTQSLDDAQIEYAALGSLILLKVLPYREEQWRYLVFNRLTRKVERIDAIGLACVQLPED 281 
1_pfamImport  202 TIKVENNTNDGLGIYREPVQEKNQSLDDAVFEYAAVGSLILLKILPYREEQWRYLIFNTLSRQVLRMDAIGAACIQLPQD 281 
Q21F00        237 TIKIENNTEDGKGIYSESVEDKTQSIDDAEFHYAKLGDLILIKVLPYKETVWRYFVFNTLIRSVKRIDAVGASCVQLPED 316  Saccharophagu...
WP_015047632  238 TIKVENNTQDGLGIYREPVEDKTQSLDDAEIHYARVGKLILLKILPYREQVWRYFIFNTLTQAVVRQDALAGSCVQLPED 317  Simiduia agar...
WP_012888323  334 QGIIFPGGYHLSTGAGKTFD------TDVSGLEFERVIRSANGEDVLYVFHARTGGRSLLLPYNVIRKQVSTPLSCHGYS 407  Streptosporan...
WP_014438253  309 QGVMTADGVYLATGEKQVFAavadlvAAPGGLTFDRRVVSPNGEDFLYVFYQRERGVYVLFAYNLIARQVAAPIVCNGYA 388  Phycisphaera ...
Q7UPX3        325 QGLIFPGGYYLQSGEFKRFD------HGLVDMRYERTINSPNGEDSLYLFSNVEDGTYIQLRYNQIRQSVDTPLVCHGQT 398  Pirellula sp.
WP_015693615  314 QGLIFANGFYLQTGDYKVFDk-----AGGSGYKFERRVQSPNGEDHLFSFYNQQKGTYILLSYNVIEQQVATPIHCHGYT 388  Saprospira gr...
WP_013452183  296 QGIILSNGYYLQTGENKIFD------RRIEGVKFLRKVQSPNGEDYLFVFYEEKNHDFVILSYNVIEQTVKTPIFCNGYT 369  Marivirga tra...
WP_014937349  297 QGVIYSNGFALQTGEIKVIE------TEEKNIFFDRKITASNGENFLFAFYDETSNDYALIPYNIINQTIDTPIYCNGFS 370  Riemerella an...
4_pfamImport  282 HGIIFPGGYYLQNGEHKTFE------QSMAGMRFKRSVRSPNGEDVQYIFYHPGEGRAVLLTYNMVTRQLQNPIFGHGYA 355 
1_pfamImport  282 HGIIFPGGYYLQSGENRSFE------QNMQGMRYRRSIRSPNGEDVLYVFYEPESGRMALFKYNLIERALQPPIIGHGYA 355 
Q21F00        317 HGIVFPGGYYLQNGEYKTFE------EQTDGLRFKRVIRSPNGEDVLYVFYEPGEGVVALLAYNMIDKKLLNPIFGHGYA 390  Saccharophagu...
WP_015047632  318 HGVIFPGGYYLESGETKLFD------QVDKGFRFKRRVKSPNGEDVLYCFYEPASGQLVLLSYNLIEKTLRNPLLCNGYA 391  Simiduia agar...
WP_012888323  408 LFDDGTLIVFRATSD-EPSRVHPMQVWQTPYTSDLYAAAQPV---GTGPLERIGNAELVRGISDCLSVARMVEEMAPSVP 483  Streptosporan...
WP_014438253  389 FRDDGRLLLFKSPEGaEPQKHHAVQNWTTPFVGPDHVAPAVAgggDDNPLKRIGNRDVVRAMAEARQVLGLATREDLYQS 468  Phycisphaera ...
Q7UPX3        399 FFEAGEMVCFKGQD--TPQKHHAIQLWQTPFTSEDYLPE-NQ---TDSLLFKIGNKDLVRGMAECSELLQLIEKDDSYND 472  Pirellula sp.
WP_015693615  389 LFPNGELCYFRAEE--SATKHHMIQIWQTPYIEGDIIPS-EH---TDSFLYKVGNRDIVRAMAECQELLSLLGKDETYSD 462  Saprospira gr...
WP_013452183  370 LFADGEMCYFNTEK--EPSKTHLIQIWQTPYTK-ELIPNDEF---KDHELYKIGNRQIVNAMAEIQELIVLLNKEDSYNG 443  Marivirga tra...
WP_014937349  371 LFDNGILAYLKNT---EESKNHLVQLWQTPFTK-ELVISETL---RENELFKIGNKDLVKAMADCQELIVLLNKKDSYAG 443  Riemerella an...
4_pfamImport  356 RLEDGRMVIFSAEGD-EPTRIHPMQVWQTPFESEEYAARQPA---RSGFFGRIGNAELVRGVSALFNLSREIDSREVSVA 431 
1_pfamImport  356 RMDDGRVVIFAAESN-EASRVHPMQVWRTPFASDDYAARQPQ---RDSFLGRIGNAELVSGISDLYSVRKEIAATEVSLP 431 
Q21F00        391 LADDGRLVIFSAEG--EPTRVHPMQIWQTPYVSDEFASNAPA---SQTFFGRIGNAALVRGISDLFSICRAVNNQSVSVR 465  Saccharophagu...
WP_015047632  392 LADNGRLVIFNAEA--EPTRVHPMQVWDTPFISEEYASRAPA---SQSFLGNIGNAAVVRGVSDLYSLCKMIGQQSVSRA 466  Simiduia agar...
WP_012888323  484 VFEALIAACARTFDHYH 500  Streptosporangium roseum
WP_014438253  469 LYADLVKQAGDLLDTYF 485  Phycisphaera mikurensis
Q7UPX3        473 LYIDLSKKSGDVLDSYF 489  Pirellula sp.
WP_015693615  463 LYFDLTKKSNDILDAYY 479  Saprospira grandis
WP_013452183  444 LYEDIEKRSQGILDGYF 460  Marivirga tractuosa
WP_014937349  444 LYTDIVKRATSILDNYY 460  Riemerella anatipestifer
4_pfamImport  432 RYSLLCQNTRRLFDIYH 448 
1_pfamImport  432 RYERLIDAARRLFERYH 448 
Q21F00        466 VYEELARSALKVFDDHY 482  Saccharophagus degradans 2-40
WP_015047632  467 GYEELISAAGRIFDDHY 483  Simiduia agarivorans
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