6ZNL,6ZNL


Conserved Protein Domain Family
Dynactin

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pfam12455: Dynactin (This model is not part of the current CDD release)
Dynein associated protein
This domain family is found in eukaryotes, and is approximately 280 amino acids in length. The family is found in association with pfam01302. There is a single completely conserved residue E that may be functionally important. Dynactin has been associated with Dynein, a kinesin protein which is involved in organelle transport, mitotic spindle assembly and chromosome segregation. Dynactin anchors Dynein to specific subcellular structures.
Statistics
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PSSM-Id: 520277
Aligned: 74 rows
Threshold Bit Score: 151.223
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6ZNL_Z         527 LQDVNRELTNQQEASVER------QQQPPPET-----FDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDS 595  pig
EEC11320       433 LREQTLGLEQQLQAEPAQ---------LAPPAe---vSGLALRLAQSKAHTRAIDLELRRLEVAQANRHVEYLSAFLTEG 500 
EDX10387       226 LNDQLTDLRDRNSSNEKEsl---qDPSLKMVTe---tIDYKQMFAESKAYTRAIDVQLRQIELSQANEHVQMLTAFMPES 299 
15_pfamImport    1 ---QCQELRERLNQESSKqqqqqqAKDTALITe---tIDFKQMFAESKAFTRAIDLQLRQIELTQANEHVRYLTAFMPDV 74  
EDS39730       566 LNDQCQELREKLNQESSK-------LVKDTISe---tIDFKQMFAESKAFTRAIDLQLRQIELTQANEHVKYLTAFMPEI 635 
18_pfamImport    1 LRDENADLRKQGNLAQTQ--------SQEQQVe---nIEFKMRFAESKAVAHAVEMDLRRLEITQFKIQIKLLSKFLPQS 69  
Q0ULP0         449 LQSRLADAESSRTMTEAQ------IRDTTGRIdevmdLNRHLRASNRQATFKEVQLGLYRLDAEVASKRLAISTEAQSAE 522  Parastagonos...
XP_003836564   424 LQNKAMDAESSKTMTEAM------VRDTTGKFnevmdVNRQLRTATVQSTARKIDHDLAKMELDLSRRETALWSEGAGRE 497 
Q6CGC3         389 LQAEIELWETKHREKQHD------NESMVSHVktvmeMNQKLQSLVASTRNQEIALEMEKLSSQQALDKLAIWHYFLTAA 462  Yarrowia lip...
XP_046457398  1111 MQESNYQLREALQRETNK--------PVGAPPe---vIDYQKMFTETKTFTKTIDLELRKLDVQQALQHVSYLCTYMPDS 1179 common water...
6ZNL_Z         596 ---FlrPggDHDCVL-VLLLMPRLICKAELIRKQAQEK-FDLSencse------rpglR--GAAGEQLSFAAGLVYSLSL 662  pig
EEC11320       501 ---FlaH--EHDGVL-MVLLVSRVAAKCDILASQLQQRhatpp-----------gptsE--TSEAIQFAHAGLTRFLLCR 561 
EDX10387       300 ---FmtRggDHDSIL-VILLISRIVFKCDIVVSQTRER-FPPVdaitr------eavtQ--GHAVQQYAFKCRLLHYVHS 366 
15_pfamImport   75 ---FmaRggDHDAIL-VILLVSRIVFKSGIIVSQARER-FSSVpqmdr------aailS--GHEVAQFGFRSRLLHHVHN 141 
EDS39730       636 ---FmaRggDHDAVL-VILLVSRIVFKAGIIVSQARER-FSVVptidr------saivG--GHEVYQFRFRSRLLHHVHN 702 
18_pfamImport   70 ---FfmPggDHDAIQ-VLLFVVRVSEKCDIISRQMLEK-FPIMedeklsasvgsddiiKktNEIQRQQSFTLRLLFLLSS 144 
Q0ULP0         523 ---Fl----KSLPVQ-TYFTAISVGAKASLTSSLLLTAdREMSfnggle--------------eamarLSCVEAVQCLAL 580  Parastagonos...
XP_003836564   498 ---Fi----MGEANQ-AYVVTKRLDTKCKILKEALFSTqKQMShggrld--------------daysqLNICDATVHLNN 555 
Q6CGC3         463 espIttPgsDVDVVVsAHLRFKRTAALLSIIVETILGAdYDET------------------SVEEQQL----RLALKLAH 520  Yarrowia lip...
XP_046457398  1180 ---FmaRggDYHSVQ-QLLLMSRLLFKCDMLAAQVKEK-FPGsagdl-------sntlK--SPAADQCIFGARMLHWLFS 1245 common water...
6ZNL_Z         663 LQATLHRYEHALS-QCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQp-- 739  pig
EEC11320       562 LQGLLHQYGTALE-TCSVELFTKTATLYPEMLVHEKLVDLYLQLLRKDELDENIPLGHLERALSYFESLYAVHLSGEl-- 638 
EDX10387       367 LQCALHQILYGLN-SCQPDTLLRAGSSLPEMVAQEKIVDGIIELLKSNQLDENSTTDNIEKCVAFFNAMNSVLLAGEql- 444 
15_pfamImport  142 LQSIMHQFLFSMT-GCKADTLLKIGAALPEMLAQEKMVDEIVDLLKANQLDENSSTDNLEKCVTFFNAMYVVLLTGEdl- 219 
EDS39730       703 LQSIMHQFLYGLT-ACTADTLLKIGASLPEMQAQEKMVDEIVDLLKANQLDENSSTDNLEKCVTFFNAMYLVLLAGEdl- 780 
18_pfamImport  145 IQTILSQYTDSLK-SCSIELYLKIASLYPELKTHEKVIDGCIELLKKDRLDETVSLDNVEKALNYFVSLYNLHLADNkv- 222 
Q0ULP0         581 LQTGSKRLYSAME-TCDLADFAAFGPIDQELRVVEKTLDHTHEALVNDEINFTDMANSLAQSLKIQDAVLV----DQqni 655  Parastagonos...
XP_003836564   556 IEDRNCRLQWTMH-TASLAQFTAMGSIYQDLLTLEQVLDEGLNSVKTDAINFDELPSSLMRSSRTYEAILA----SQhei 630 
Q6CGC3         521 VSALAHTLATLLEwRPDVDAPFLHG----ESEQLEQSVNSYIDTVSEGALLVDEAVNMVPVFIQTF---------DD--- 584  Yarrowia lip...
XP_046457398  1246 LQGVVRQFSYALN-SCSPQQFLEMGTLHQEMLQQEKAIDFYVELLRKDQLDENVQLDALEKVVNYFNSIYAVQFSsv--- 1321 common water...
6ZNL_Z         740 --eDSTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQ------------EASDIALLLRDLETSCSDIRQFCKKIRRRM 805  pig
EEC11320       639 --rDDGQLLADGLRCLGLACEAVQCALGWVRRLLSS--------------DAGDLAALLDAALASAAEALQGTRKLRRRL 702 
EDX10387       445 --lNEIQMIRDCVASLGAACESILSDTAIAKVIIQEAG------------ATSDSVLLLQFLNENMESVRQQVKLIKRRL 510 
15_pfamImport  220 --vNETQIVRDCTASIGAACDSIANDSNIIKILIKPGD------------ETSDSGLLLQYILQNVENIRQQLKLVKRRL 285 
EDS39730       781 --lNETQIVRDCTASISAACDSITTDAAVIRTMIKGGD------------ETSDSGLLLQYIVQNVEAVKQQLKLIKRRL 846 
18_pfamImport  223 --nNCRDLLSNFVLIMKSGVDVSLVDVAMIDKCLS---------------PNAEGRERIDMLKTYLGDIQEFSKKIKRRL 285 
Q0ULP0         656 lamMPEDESTAHIQRIVARLDYLGSNFAVITTMMSF--------------LASNATELLVKTAAQDINPDDVTAAAQRVL 721  Parastagonos...
XP_003836564   631 lctRPENEISARAAAFETRLWFIKEVFAVLTWALAKVPdsv-------qrEIRDVQETLREQINKVDITYERARKFaetl 703 
Q6CGC3         585 --------------FLSTQTDYNRTYLDMSKLAIHTRVsilllkqlghrsCANSLSKLKYWIDNQDKTARVPSPIIDNAV 650  Yarrowia lip...
XP_046457398  1322 --vNGAALLTDHGKVLLASCCGLTALGTRVQAMMQSGH------------EGSDVAKSIKEVLSQANQWQQYARTIKRRL 1387 common water...
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