5WYL


Conserved Protein Domain Family
U3snoRNP10

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pfam12397: U3snoRNP10 (This model is not part of the current CDD release)
U3 small nucleolar RNA-associated protein 10
This domain family is found in eukaryotes, and is approximately 120 amino acids in length. The family is found in association with pfam08146. This family is the protein associated with U3 snoRNA which is involved in the processing of pre-rRNA.
Statistics
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PSSM-Id: 520242
Aligned: 137 rows
Threshold Bit Score: 45.6568
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5WYL_A        247 LLQQIGPVlSEAMVmKDVPGIQIASYMVVAILAAKGSLNDNILTAFMEQLVHgWT--VDTLRPGLVCLTMLAQHRS--AK 322  Thermochaetoi...
XP_002956405  245 FLAAILPYlLEGIGkGAAQEYRAATLMAVAELFSRATLGRDFVKVILNTMLKyTEpvPEHVRTTLLVMAHMAVTQKh-IQ 323 
XP_032230509  312 IITRLLPNiIEGLKsR-ISEYRAASYMIVAQLCLKCTLDRKLLKSLMEHLCKhLG--PELVNEGLLCLTAMCQTQD--LI 386 
8_pfamImport    1 IISKLLPFvQKGLKsP-LTDYRASSFMIVCQLAVKVVMEASLVDSLAAHVCRsLLggAALTREGLGCLTVLLQNQK--EG 77  
XP_028903501  238 TVAKLLPFiQKGLK-SSTADYRAATYMIVCQLSVKVPLEATVVHSLALQISKtLAkiPSLVKDGLCCLVVLLQRQK--TD 314 
EFX87391      234 QLAILLPSlLNGLV-SKFPDLIAGCYMIIAQLNRKANLNQRVVEDLALCILKgMI--PALSSEAITLLIVLWDKQKdrVF 310 
XP_011154495  235 QINYLLPTlFYGLK-SSVLDLTAASYMIIAHLMTKVKLDDCTIEKILLKTFKkTN----LKQEATTLLLYLYQSPInrLT 309 
XP_025270931  234 QVNHLLPIlLYSVR-SPIPDLASGSYMIIGKLMMKVKFNADTTEKLLLKIFMkTH----LKEEATILLLHLYQSPInrLT 308 
XP_040554197  238 IVSMLLPYvQKGLKsS-VQDYRAATYMIICQMTVKVTVDSSLVHSLMLQISKtLSkvPSLAREGVACLNLLLQTQK--GD 314  chicken
XP_029695503  238 FISKLLPYiQKGLKsM-LMDYKAASYMIVGQLAVKVVMEASLVDTLAVHISKsLLkePVLAKEGVGCLIVLLQNQK--DG 314  torafugu
5WYL_A        323 QLS--GRVAKAVIKVPDLVSSLRDISKEHQV--DKLANGLVLAF 362  Thermochaetoides thermophila DSM 1495
XP_002956405  324 LLS--DKTLKYLSSLPNLISELGSLAQRGNIrtGPLLMLIVRSL 365 
XP_032230509  387 ELS--RRSFKSLTRTPNLPQHLHGLTSSHNM--TALLQIVIPQL 426 
8_pfamImport   78 SVG--PRAFLSLSRVPALASTLQAMATNHDV--APLLRYLLPHL 117 
XP_028903501  315 GLG--KKPFNYLCSVPDLVPTLREMATAFDI--SPLLRYVLPIL 354 
EFX87391      311 NVNhmRNCIEFLKSNAEFLPSIGILASCYQV--SSFVSPVIQGF 352 
XP_011154495  310 VIP--QSLVLQLSSLLWFIETVSQIHSK-SMnaSRFAVPFLQAA 350 
XP_025270931  309 IVP--QSVVLQLSNLSWFVETIVKIHSS-GIniSQFIVCFLQAA 349 
XP_040554197  315 NLG--KKPFNYLCRNPELVTLLQGLSEGYDI--SPLLRYLLPHF 354  chicken
XP_029695503  315 AVG--PRASTHLRVMPTLVSTLEVMALTHDV--Gpllhyllphl 354  torafugu
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