Conserved Protein Domain Family
DUF3656

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pfam12392: DUF3656 (This model is not part of the current CDD release)
Collagenase
This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length. The family is found in association with pfam01136.
Statistics
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PSSM-Id: 520239
Aligned: 270 rows
Threshold Bit Score: 46.735
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCX47721      383 YRNRNKmrtdmmagntadrtlkvdf------------------tlrttewgvvlkaedetgAYVETSAPLELvpaskpqt 444
CCX40866      384 YRTFGKalqdelkktyekdtrklpiygmlrv------kegepislqlwdnggnsvfvsgsiVEPAGSSPMLP-------- 449
jgi:UWK_02551 418 FTMSEEaclrkiktapvparsinlciqcne--------adsiftvmadcngnevvkvypvdMVPANRSPLKK-------- 481
Q3A8G5        395 FTMSEAacrrklqqagkipdhidlhielq----------detltlagrsgavvleqsydvpVFPASDSPLSS-------- 456 Pelobacter car...
Q39ZN4        396 FTMSENaclkrldavkpgkipcalelsla---------getlrigaqaagaefaaefpvglLEPSTTSDMA--------- 457 Geobacter meta...
Q747C0        396 FTMSENaclkrldavkpcaipcdlslald---------getlqvtglaaggrveaafpvgvLEPARTEDMT--------- 457 Geobacter sulf...
WP_012645128  396 FTMSESaclkkldavkgdklpcklqlamv---------dhnlrieamvagkneclefplgqLEEARTTDME--------- 457 Geotalea daltonii
WP_011936971  398 FTMSENacakkldtvkgdklpcelslali---------getmritaqvagkevcrefhlglLEPARTTDME--------- 459 Geotalea urani...
ACH40544      398 FTMSENaclkrlegakgdsipcmlklshq---------dqslrieaevlgqrfatefelgpLEPSRSSDME--------- 459
jgi:Ppro_0065 414 FTMSENacmrrlesvkgeklpcrlqlsascsspveeggevilhvsadaaavrldldfplgrLEPARTAEMA--------- 484
CCX47721      445 EVRANTLRKLGGTHYTPGEISDeS---GDwFI-PVSLLATMRRDTLERLDAARL 494
CCX40866      450 MKLRENISKMGATPFVLADLQT-DidrYI-YV-NISEVNRVRRAACEALEAAIL 500
jgi:UWK_02551 482 ETLLKIFSQTGHPELVLENLKAkDl--PSvVIkP-SRLKEIRRDFYAMLDgilk 532
Q3A8G5        457 DTLRSVFERSGKHELVLGNLSTgPl--PPvVI-PPSRLKEVRRLFYQAVCDQLg 507 Pelobacter carbinolicus DSM 2380
Q39ZN4        458 GVLRAQFSRTGETPFELLGLDApGf--PSvLI-PPARLKDIRRDFYRRLGEKVA 508 Geobacter metallireducens GS-15
Q747C0        458 GVLRAQFSRTGDTPFELRGLDApGf--PRvLI-PPAKLKEIRREFYRLLAEEAV 508 Geobacter sulfurreducens
WP_012645128  458 AVLTAQFNKTGDTAFTLASLAApGf--PAvLI-PPVKLKEIRREFYRRLAEKVa 508 Geotalea daltonii
WP_011936971  460 SVLAAQFGRTGDTAFILSALNApDf--PAvLI-PAAQLKEIRREFYRWLGDKal 510 Geotalea uraniireducens
ACH40544      460 GVLKAQFSKSGDTQFTLASLSApDf--PAiMI-PPPRLKEIRRNFYAWLAEAsv 510
jgi:Ppro_0065 485 AVLKAQFAKTGEAPFRLESLEApDf--PSlLI-PSAAFREIRGRLYAALAEKVS 535
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