Conserved Protein Domain Family
Casc1_C

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pfam12366: Casc1_C 
Cancer susceptibility candidate 1 C-terminal
This is the C-terminal domain of Cancer susceptibility candidate 1 (Casc1) which has many SNPs associated with cancer susceptibility.
Statistics
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PSSM-Id: 432508
Aligned: 9 rows
Threshold Bit Score: 393.357
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001956982         784 EVTHWTTKHIIDLEINKVTHKLTFKTDRLGIFGLAFKRydhfpfrewslqpneenPEEVIFSLDTFHVRILFYISAKGVR 863 
EDW44297             717 QVTHWTTKYVKDTVIDRETNRITFKTDRLGLLGLAFKR-----------------PDEIILSVDTFHVRIFFYITCKGVR 779 
XP_001956984         853 KVTHWTTEYILESNFDYELKVLTVKTDRLGDFGFAYPRyihfpfrnweldqnelnPDELIFTVDTQFVRVVFFISNKGIR 932 
XP_046867924         909 KVIHWTTKYIQRTELDRDNLIVTVRTDRVGLFGFAFKRyahfpfrhwcmepseenANEIVFTLDTFHVRVVLYISNKGIR 988 
XP_001983474         887 KVKHWTTKYIKRTEYDPQSFTFKIQTDRLGIFGFACKRyehfpfrhwqlqyneenSDEIIFTLDTHHVRIVLFITNAGIR 966 
WGS:AAPU:GI16836-PA  882 KVKHWTTRYIKHTEFLPESCTLKIQTDRLGVFGFAFKSyehfpfkgwslqynkdnINEIIFTLDTYHVRVVLFITNAGIR 961 
XP_002046295         928 KVKHWTTKYINRTVFEPETLTIKIQTDRLGIFGFAYKRyeqfpfrnwtlqyneedINEIVFKLDTFHVSIYLFITNAGIR 1007
XP_002046296         829 KVIRWSTRHIMSSQFDRQARTMHIKTDRLGIFGLAYKRyehfpfrdwsmqpneenNEEIILSVDTFHARVILYITAQGIR 908 
XP_002068325         852 QVLHWTTKYILESHFNREEATITLKTDRLGIFGLAFKRyehfpfkdwymqpseenPEEIMLRVDTFHVRVILYISGLGIR 931 
XP_001956982         864 GYVTDIIKGYAAKPVKYLEIKEPIVDFKMLRKIFVAKNINIFAEHDASFYITNGYYSMKHVASEQHTYKMMALHCKSMKF 943 
EDW44297             780 GYVTDLSKGYTAKPIKYLEIVEPISDFRQMRQIFINKNINIFAENDASFYIENGYFSMKHVALEMHTYNIMALHCKLMKF 859 
XP_001956984         933 GYVIDIPKEYVANPLKYLEITEPIVDFVELRKRFQDMNLNVFAELDASCYIDQGYFSIKHLAAELHVYDIMSIHCKLMKF 1012
XP_046867924         989 GYVTDLTKEYTAKPVKYMTIEEPIFDFGDFRKRFQEKNVNIFAEHDAKFYIENGYYSLKMLALELHVYDAMAIHCKMIKF 1068
XP_001983474         967 GYVTKLTDEYVAKPVKYVEIEQPISDYRELRRRFCEKNVNIFAENDALFYIENGYFSVKHLAAELHVYDAFAVHCKLVKF 1046
WGS:AAPU:GI16836-PA  962 GYATKIIEEYVANPIKYLEIKEPTSDFTELRRRFCENNINIFAAHDACYYIEKGYFSQKHLATELHVYDAFAIHCKLIKF 1041
XP_002046295        1008 GYVTKMTTEYTARPVKYLEIKEPISDYRELRRRFCEKNINIFAEHDACYYIENGYFSEKHLATELHVYDAFAIHCKLMKF 1087
XP_002046296         909 GYVTDITKNYVAHPVKYLDIPNPISDIRELRRRFYEKSINIFAENDACFYIDNGYFSVKHVATEDHTYDAMALHCKLMKF 988 
XP_002068325         932 GYVTDQSKAYVTKPKKYLEIIEPISDFQELRQRFWEKNINIFAEHDASFYIDNGYFTIKHVAIEDHTYDAMALHCKLIKF 1011
XP_001956982         944 YRSSWNRLANRRDIILGMKLAKDNTDYSEVTVRIQPESTTFVTVTENCSDQENVIVLSYKNT 1005
EDW44297             860 YRSSWNRLADRRDIILGMKIAKDNSDYSEVTMRITPEKTTFVQISENCSDKVNVIVLSYTST 921 
XP_001956984        1013 YRSDWNRLATNRDLILRLRNPKDMHDASEVTARVTPESATFVEVSEVCTENVDVIKLSYQST 1074
XP_046867924        1069 FRSEWNRLATRRNIVLCLRNPKDPNEGAEVTCRVTPDNSTFVEVSELCSDDLDVFKLHYQPT 1130
XP_001983474        1047 FRSDWNRLSTRRNIVLCMRNPKDLNEGA-VTIRVTPNNSTFVEVSEPCSDNLETIKLAYQLT 1107
WGS:AAPU:GI16836-PA 1042 YRCDWNRLAPRRNILLCLRNPKDVNDGADVTIRVTPDNSTFVEVSEACTDDVDVIKLSYHLT 1103
XP_002046295        1088 YRCDWNRLATRRNIVLCLRNPKDLNDGADVTVRVTPDNSTFVEISEACSDNLDVIKLDYQPT 1149
XP_002046296         989 YRSSWNRLASRRNILMGMKNAKDNSDYTEVTMRITPDSVSFVEVSELCSDNLDVIRLDFKNT 1050
XP_002068325        1012 FRSNWNRLASRRNILLCMKNAKDNTEYSEVTVRITPDNATFVEVSELCSSDLNVFKLDYKPT 1073
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