Conserved Protein Domain Family
DUF3646

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pfam12362: DUF3646 (This model is not part of the current CDD release)
DNA polymerase III gamma and tau subunits C terminal
This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam00004. The proteins in this family are frequently annotated as the gamma and tau subunits of DNA polymerase III, however there is little accompanying literature to back this up.
Statistics
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PSSM-Id: 520229
Aligned: 57 rows
Threshold Bit Score: 90.7155
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014746201 511 LDRWREIIDLLRRHREIRIVPELRAAAHVaeITVTAaeRRLVLAFEPGTDGGLATKLQDLLSRIDDT-PWQVlaagalnd 589 Tistrella mobilis
WP_025310985 439 YPTWASVVALVEQARDLKLLIEVKTCLRL--VTYAP--GRIELQPTDAAPRDLIPRLGRVLQTATGA-RWAI-------- 505 Roseicyclus elo...
Q28KG9       440 YPTFESVVALVEGARDIKLLIEVKTCLRL--VSYAP--GRLEVEVTDTAPRDLIPRLGRMLHTATGA-RWGI-------- 506 Jannaschia sp. ...
WP_020950679 439 FPDFEAVIALIRRMRDMKLLLEVEDHLRL--VRYAP--GRIEFEPTDKAPRDLAPRLAERLRSWTGGaRWVV-------- 506 Paracoccus amin...
WP_011749885 438 FPDFESVIELIRRMRDMKLLLDVEDHLRL--VRYSP--GRIEFQPTDKAPRDFAQRLAERLRGWTGGqRWAV-------- 505 Paracoccus deni...
Q3IZZ8       444 CQSFEQMVELIRQKRDMKLLYEVETGVRL--VRFAP--GRIEFEPAPDAAPDLAARLSQRLQGWTGG-RWGI-------- 510 Rhodobacter sph...
2_pfamImport   1 YARFEDVVALIGRMRDVKLLVEVEKGVRL--VHYAP--GRIEFEPAPGAPRDLAQTLAQRLQGWTGA-RWGV-------- 67 
WP_012177328 446 FRRFDDVVALIRSHRDVKLLVEVEGCLRL--AAYSP--GRIEFAPTENAPRDLAARLAARLQSWTGA-RWAV-------- 512 Dinoroseobacter
Q16BD3       441 FVSFDHVVELIRANRDVKLLVEVEGCVRL--AQYQP--GRIEFAPTENAPADLAQRLGQRLQLWTGN-RWAV-------- 507 Roseobacter den...
Q5LML3       442 FPTFEHLVELIRANRDGKLLADIEMDLRL--VSYQP--GRIEFQPTERAPTDLAQRLGSALQRWTGN-RWAV-------- 508 Ruegeria pomeroyi
WP_014746201 590 pALTAAArATPTLVQYDEMRNRRMLALARR-HPMVEAVFAAFPGATLEAV 638 Tistrella mobilis
WP_025310985 506 -SVASAG-GGPTIAEEAEAAKRAMEAEVTD-HPLMQAVLSKFPTAKITQI 552 Roseicyclus elongatus
Q28KG9       507 -SVASSG-GTTTIQEQEQAAQKEAEAEVTQ-HPLMQAVLSRFPKARIAEI 553 Jannaschia sp. CCS1
WP_020950679 507 -SVANEG-GAPTISEARAAERAATQARVME-TPLAQAIFSAFPAARITAI 553 Paracoccus aminophilus
WP_011749885 506 -TVTSEA-GRPTISEQRAAREAEARARAMQ-NPTVQAIFAAFPGAKITQI 552 Paracoccus denitrificans
Q3IZZ8       511 -SVVSGG-GAPTLAEERDKGRLEEEARALE-NPLVQAVMAAFPGARIAEI 557 Rhodobacter sphaeroides 2.4.1
2_pfamImport  68 -SVVSEG-GAATIDETRNAATLAAEAEARAeNRVVQAIFAAFPTAKFEDI 115
WP_012177328 513 -SVVAEA-DAPTIAETRDAEKLEMERNALD-HPLVAAVFAAFPKARITEI 559 Dinoroseobacter
Q16BD3       508 -TIVNDA-SAPTIAEKRDAAELDLQSKALE-HPLMQAVLTQFPKARITSI 554 Roseobacter denitrificans OCh 114
Q5LML3       509 -SVVAQG-GGKTIDEIRNAEKYALEEKARE-HPLVQAVLAQFPKARITHI 555 Ruegeria pomeroyi
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