Conserved Protein Domain Family
DeaD_C

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pfam12343: DeaD_C (This model is not part of the current CDD release)
Cold shock protein DEAD box A
This domain family is found in bacteria, and is typically between 68 and 89 amino acids in length. The family is found in association with pfam00270, pfam00271, pfam03880. This family is the C terminal region of DEAD box A, a protein expressed under conditions of cold shock which is involved in various cellular processes such as transcription, translation and DA recombination.
Statistics
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PSSM-Id: 492558
Aligned: 7 rows
Threshold Bit Score: 37.2764
Created: 21-Aug-2024
Updated: 4-Feb-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_002441966 562 QPRPDRGg--RSFG-GERREggrRDG-----G--RGFgGERREGGRgdgrrfsGER--RdGN-------RGPRRD-DsAP 621 Shimwellia blattae
WP_095846098 564 GGERRGG---RPFN-GERRE---GAP-----R--RSF-GERREGGN-------AER--R-GGnfnrdgkPAARRD-D-AA 616 Gibbsiella quer...
WP_006709359 565 PNERSGHs--RPFN-GERRE---GAP-----R--RSA-Gg-------------GDR--R-SGnfnrdgkPAPRRD-D-SA 612 Serratia symbio...
1_pfamImport   1 GGERRGGg--RPFS-GERREgagAPP-----R--RSFsGDRAPTGg-------GER--R-Gnrdg-qrsAAPRRD-DaAA 58 
WP_072927119 579 AGDRREGgrgRSFGgGERREggaRPP--------RPFnGERREG---------GER--R----------PAGNRD-GqRT 628 Yersiniaceae
BAN96674     554 RTERRSGg--RDFG-GERRg--nREGgnregGapRRF-SERREGGRe------GGRfsReGG-------RGPRRDeGaAA 614
P0A9P6       568 GGERRGGg--RGFG-GERREg----------G--RNFsGERREGGRgdgrrfsGER--ReG--------RAPRRD-DsTG 621 Escherichia col...
WP_002441966 622 R-------PARRFGgDA 631 Shimwellia blattae
WP_095846098 617 Pa-----aPRRRFG-DA 627 Gibbsiella quercinecans
WP_006709359 613 Pt-----vSRRRFG-DA 623 Serratia symbiotica
1_pfamImport  59 PaaaaaapARRRFG-DA 74 
WP_072927119 629 P---------RRFG-DA 635 Yersiniaceae
BAN96674     615 P--------RRR---DA 620
P0A9P6       622 R---------RRFGgDA 629 Escherichia coli K-12
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