Conserved Protein Domain Family
HTH_OrfB_IS605

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pfam12323: HTH_OrfB_IS605 
Helix-turn-helix domain
This is the N terminal helix-turn-helix domain of Transposase_2 pfam01385.
Statistics
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PSSM-Id: 492541
Aligned: 79 rows
Threshold Bit Score: 48.3371
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012289839   1 MrkkkgvKNKAIKYRLYPTTEQEIYFSKCFGCCRKIWNLMLSDREKSYKET 51  Finegoldia magna
WP_012102054   1 M-------LRGLKTEISPTEEQKQIIHQSIGICRYLYNGYLANNKELYQQY 44  Clostridium kluyveri
WP_012575331   1 M-------IRTYKVMLLPNNKQKTKLFQCAGVARWAYNFALAQQQENDKqG 44  Anoxybacillus flavithermus
WP_006656251   1 M-------TISHKIELIPNNKAKTYFKKAFGCSRLAYNWGLAKWQEYYKQG 44  Helicobacter canadensis
WP_011930716   1 M-------LIAHRIALDPTNAQRTYFARASGTARFAWNWALAEWQRQFTaR 44  Acidiphilium cryptum
CDE85879       1 M------ITISHKIELVPNNKQKSYFRKAFGCARLAYNWGLAEWQRRYKEG 45 
WP_012103476   1 M-------IRGIKVRLYPTKEQEILMWKSAGVARFTYNWGLAYLNSYYKeN 44  Clostridium kluyveri
1_pfamImport   1 M-------ILAKKVRLIPTPEQEQVLRNHAGAARFAYNYCKRMSDRYYKLF 44 
Q4Z968         1 M--------ITKKVRLKPTKQQELKLRKSADIARFIYNWTLAKQQENYKqG 43  Staphylococcus virus Twort
WP_012811760   1 Mk-----IHRAYRYELAPNRMQRVMLAKHAGVARFAYNWGLARRIALHEeA 46  Alicyclobacillus acidocaldarius
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