Conserved Protein Domain Family
IFT46_B_C

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pfam12317: IFT46_B_C 
Intraflagellar transport complex B protein 46 C terminal
This family of proteins is found in eukaryotes. Proteins in this family are typically between 298 and 416 amino acids in length. IFT46 is a flagellar protein of complex B. Like all IFT proteins, it is required for transport of IFT particles into the flagella.
Statistics
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PSSM-Id: 403511
View PSSM: pfam12317
Aligned: 44 rows
Threshold Bit Score: 243.636
Threshold Setting Gi: 328724486
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002003677        165 TPDKWEQLPLQPELKELFPYILKYTPQTIDTPYHLQPFVPEFVPAVGDVDAMLKVQAPallqpqa-prqrelDEQLQ--- 240 Drosophi...
ESO01215             35 NPNDFENLPVTAEVKELFQYITRYSPPNLDLTFKLIPFIPDYIPAVGDIDAFLKIPRH--------------DGKRD--- 97  Helobdel...
XP_003248165         83 ynKDVDLLHLSQDIKDVFKYISMYYPQKPKLEFRLQPFIPDYLPAVGDADAFIKVIAP--------------DPSIQa-- 146 pea aphid
XP_008198714        107 DPKEYENLDVSPEIKDIFQYITKYIPQQMGLDHKFKPFVPEFLPAVGDIDAFLKVLPPktll-------sdaDFVANq-- 177 red flou...
XP_002064519        173 TPDKWEQLPLPGDLKELFPYILKYTPQSIDTPYHLQPFIPEFVPAVGDVDAFLKVQAPaliqpqsqqsqrdlDEHLQ--- 249 Drosophi...
WGS:AAPP:GF14836-PA 190 TPDKWEDLSLPGELKELFPYILKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPpllqpq---rqrelDDHLE--- 263 Drosophi...
EDX05389            192 SPEKWEDLSVPGELKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPpllqpq---rqkelNDHLG--- 265 Drosophi...
ETN60741            117 NPKLYENIDAPAEVKDLFQYIPRYTPQRIAIDYKLKIFIPDFIPAVGDIDAFLKVFSPspvnek---nikklNTHIQ--- 190 Anophele...
XP_001853252         39 NPKFYDNIEAPSEVKDLFQYITRFSPQRVTIDYKLKIFVPDFIPSVGDIDAFLKICSPpfined---nkkilTEQIK--- 112 southern...
XP_004923392        158 DPKLYQDLKVPPEMENIFQYIMKYTPQKIDIDFKLQPFVPEYVPAVGDIDAFLKVTTPacdvr----ggqlaEQVLEhid 233 domestic...
XP_002003677        241 RLGLELLDEPSGAQSEPSLLNMKLRSVLSGSRAGnSRHAARSATqVPTaKTAKDIEKWIAEVEQVHM-----TQSMYDAQ 315 Drosophi...
ESO01215             98 KLGLTIIDEPCAKQSDPVVLELLLRSLSKDTVVS-SKINVKSVDiDQA-DSTKHIDSWIKNIDNLHRsk--pPPTIHYTK 173 Helobdel...
XP_003248165        147 GLGLEYLDEPCLNQSDPCLLNLQLRASCSSSs---KSLVVKKLE-SAE-KNPKVIEQWIRDINELNRg---kTSAFFYSK 218 pea aphid
XP_008198714        178 QLGLVVLDEPAANQSDPALLHLQLRAESVKTTND-STVVVKKID-NVE-KNAKIIDKWIKDISALHKsk--sFPAVRYTE 252 red flou...
XP_002064519        250 RLGLWLLDEPSGAQSEPSLLNMKLRSVLSGNRGPnPRHAS-SASlVPTaRFAKDIDKWINEVEQVHM-----TQSLYDAQ 323 Drosophi...
WGS:AAPP:GF14836-PA 264 KLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSRGRnPRHAS-SASqIPTaRSGKDIDKWIAEVEQVHM-----TQSMYDAQ 337 Drosophi...
EDX05389            266 KLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGRnPRHAS-SASlVPTaRSGKDIEKWITEVEQVHM-----TQSMYDAQ 339 Drosophi...
ETN60741            191 NLGLMILDEPCGDQSDSVLLQMKLRSIFTKP-IEtPSAIV---------RSSRDIDRWITEIQALRTsqsvqGAASAQKQ 260 Anophele...
XP_001853252        113 KLGLETLDEPCGEQSDRVLLQMKMRSIFTKP-LEtPSAIA---------KSTKDIDRWITEIQSLKAnq--sAQNVNALK 180 southern...
XP_004923392        234 NLGLTVLDEPSAEQSDSALLHLQLRAISKTNHSK-TTVLTKKID-NPE-SNPKAIDRWIKDVAELHLsk--pAPTVSYTS 308 domestic...
XP_002003677        316 PRKDIDALLENWPRSFGTPASKEAVDEAyraclQQQISLVDYVRTLCEHFGVegPLEt---qSDYIHNIQTLFALYL 389 Drosophila ...
ESO01215            174 KMPEVDDLMQEWDSEIEDVVKDVSFPI------EIDCELAQMVDIVCGVCDV--PVH-----SNKVESLHLLFTLFS 237 Helobdella ...
XP_003248165        219 KMPDVETVMEPWMDGGDQK--SRDMPD------FENADLLTLVDEVCDYFGI--PKT-----DTKVESLHLLFSVYV 280 pea aphid
XP_008198714        253 PMPDLDELMQEWPESMEKQLSENGFPEP-----KGN--LSDYVQEVCGLFQI--PV------KNKIQALHLLFSLFA 314 red flour b...
XP_002064519        324 PRKDIDALMEDWPRSFGDSDTKDALEQAyrlclQQQISLSDYIRLLCEQFGIegPLDn---qTDYIHNVQTLFALYL 397 Drosophila ...
WGS:AAPP:GF14836-PA 338 PRKDIDALLEDWPRAFGEAETKSALDQAyksclQQDISLADYVRVLCERFGVegPLEs---qADYIHNVQTLFALYL 411 Drosophila ...
EDX05389            340 PRKDIDVLLEDWPRSFGDEETINALDQAyrsclQQNISVAGYVGVLCERFGVegPLEs---qADYIHNVHTLFALYL 413 Drosophila ...
ETN60741            261 PNINIDNLMSEWPEEVERTLDTVGFPPA-----NLDCSLTEYIKIICNIFDI--PLPsdesqADYIYALYNLFNLFL 330 Anopheles d...
XP_001853252        181 SMINIDNLMSEWPEEVEKLLDTFGFPSA-----NLDCSLIKYIEIVCNIFDI--PVNrnngqAGYIQALYNLFNLYL 250 southern ho...
XP_004923392        309 KMPDIDTLMEEWPESMEEALNEVGFPSA-----SLDCSLSQYCELVCGMFDV--PVVgs-gaPGRIQAVHQLFTLYC 377 domestic si...
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