Conserved Protein Domain Family
HoxA13_N

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pfam12284: HoxA13_N (This model is not part of the current CDD release)
Hox protein A13 N terminal
This family of proteins is found in eukaryotes. Proteins in this family are typically between 149 and 306 amino acids in length. The family is found in association with pfam00046. This family is the N terminal of the Hox gene protein involved in formation of the digital arch of the hands and feet as well as in correct genital formation. Mutation of the protein is associated with hand-foot-genital syndrome.
Statistics
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PSSM-Id: 520181
Aligned: 17 rows
Threshold Bit Score: 96.9006
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q3V614        28 SKNMDGLvGGGNFatAASQCRNIMAhsaaaaalggHASGLMHSs-AGFSTVDVSTSGSGETaatsGKQCAagqcaAAAAM 106 Japanese medaka
XP_040050454  31 SQTMEGL--SGNC--PATHCRDLMShpa----lgrHSGTIATHqgSVYSDISSADTG---------RQC--------PAP 85 
Q3V600        31 SQTMEGL--SGNC--PATHCRDLMShpa----lgrHSGTIATHqgSVYSDISSPDTG---------RQC--------PAP 85  Japanese medaka
XP_005995687  31 NPGMEGL--SGNC--PATHCRDLIShpa----lgrHSSTIATHqgPVYSDIAAPEAG---------RQC--------PAP 85 
P50207        52 APSMDGL--GGSC--PASHCRDLLPhpv----larPPAPLGAPqgAVYTDIPAPEAA---------RQCA-----PPPAP 109 house mouse
XP_002935723  10 QWEMEGLrGGGEGp-SSNQCRNFLSsps----vfgSPSSRTVPg-LAYSAPDRSGSARAEAt----KEGP-----TCPAS 74 
XP_007232293  27 NKNMEGLvGSGNF--AANQCRNLMAhsa----lsaHPSSLVHGs--SYSTVEVSTSSAAET----SKQCT-----PCPTV 89 
XP_006638382  27 NKNMEGLvGAGNF--AANQCRNLMAhsa----lggHPSTLVHGs--GYSAVDVSGSGSGEP----GKQCA-----PCPAV 89 
Q4SIW5        30 SKNMEGF-AGGNF--AANQCRNLMG----------HPASLAPS--TAYSSCDVPASAIGEP----VKQCS-----PCSAA 85  spotted green p...
XP_005802784  30 SKNMEGF-PGGNF--AANQCRNLMA----------HPASLAPSaaAAYSSGDVPSSGVGEP----VKQCS-----PCSAA 87 
Q3V614       107 phQSSSAAtALPYGYF-GNGYYPCRMGR-----GSLKSCT--QAAGa--aLSSQYMDTTVS--PDEYPNH 164 Japanese medaka
XP_040050454  86 --QSSSSA-SLSYGYPfGNPYYGCRLSHshnvnLQQKPCAy--------hPAEKYAEPSTAlpAEELSTR 144
Q3V600        86 --QSSSSA-SLSYGYPfGNPYYGCRLSHshnvnLQQKPCSy--------hPAEKYAEPSTAlpSEELSSR 144 Japanese medaka
XP_005995687  86 --QTSSSA-TLGYGYPfGGTYYGCRLSHshnvnLQQKPCSy--------hPAEKYAETSSSlpSEELSSR 144
P50207       110 --PTSSSA-TLGYGYPfGGSYYGCRLSHnv--nLQQKPCAy--------hPGDKYPEPSGAlpGDDLSSR 166 house mouse
XP_002935723  75 --TGPSGP-SLGYGYHfGNGYYSCRMSHgv--gLQQNPLKssSHASlggfPVEKYMDVSGL------AST 133
XP_007232293  90 p-QASSTG-PIPYGYF-GNSYYPCRMGR-----GSLKSCT--QPSAls-yTAEKYMDTPVT--SEEYPSR 146
XP_006638382  90 p-QGTSTApPLPYGYF-GNGYYSCRMGR-----GSLKSCT--QPGAlssySAEKYMDTPVP--SEEYPSR 148
Q4SIW5        86 --QNSSSA-SLPYGYF-GSGYYPCRMSHh----SSIKSCAaqSPSA----YGEKYMDTSAT--SDDFPSR 141 spotted green pufferfish
XP_005802784  88 --QNSTSA-SLPYGYF-G---YPCRMSHh----SGIKSCGaqPPSA----YGEKYMDTAAS--GEEFSSR 140
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