2YKH


Conserved Protein Domain Family
GAF_PdtaS

?
pfam12282: GAF_PdtaS (This model is not part of the current CDD release)
Histidine kinase PdtaS, GAF domain
This entry represents the GAF domain of the sensor region in the cytosolic histidine kinase (HK), PdtaS, from Mycobacterium tuberculosis. The N-terminal region of this protein is comprised of closely linked GAF and PAS domains, both are ubiquitous and form dimeric interfaces. GAF domains are known to bind heme (as can PAS domains), to be involved in redox responses and even to function as catalytic domains.
Statistics
?
PSSM-Id: 520180
Aligned: 70 rows
Threshold Bit Score: 84.2059
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2YKH_A        11 AEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVR-RdDG-VLVCVAQCRPNTGPTV--VHTDAVGTVVAANSMPLVA 86  Mycobacterium t...
Q187M1        10 TAQTYLNNNEIEKIIEVSKSLDLMASFYEADVFIDVLsKfDD-EAIVVAHGRPKE-KSM--YCENVIGKKALIENEPGVI 85  Clostridioides ...
Q834L6         9 HQYTNLSESDIKELQRTARYLSSTTLYQSADVFIDVYkEmSQ-QALVVYHKPPAKTTSL--YSGDVVGMEALLKNEPGVL 85  Enterococcus fa...
Q8Y7U7        10 LRYTDLSEHDIDELIHTAQSLSVSAMYQDVDVFIDVYnKlTS-EALVIHHTPPKTTKSL--YKNKVVGETALRSNEPGVL 86  Listeria monocy...
WP_012859568  10 KKYTDLDDSDIAELEDYAKKLSVFAEFTDTDLFIDCLiPnSD-YAVVVYQQRPVDSPTL--FKNSVLGVIVGRETEPAVI 86  Sebaldella term...
WP_013360468   7 EKFTTLNESDIQLLYNVNEFLPLISQVTNGDVFIDCMtRePD-TAIVVAEAK--KKKSL--YKKNVVGEFALRENEPAVL 81  Acetoanaerobium
WP_011971395   7 KTYTQLSDSDILILENAKQMLPLISSAIRADVFIDCLtNiPN-TAIVVAEAKQSQKESM--YQHSVVGKFALGENEPAAL 83  Alkaliphilus me...
WP_014552465   7 QKETRLSEQDIEQLEKLAEQLPRIANLVKADVFIDCPiDdPD-ALLVVAEAKPRGAKAIsnYQGSVVGELAVRTNEPAAL 85  Halanaerobium p...
Q892C7        20 LKNTSLSESDIKIIQNISKTLQFVADSSKADVFIDCMtKnQKcAAVVVASAKTRDAKSF--YKEDVVGKLAIRKNEPAVL 97  Clostridium tetani
WP_014432253   6 siaAGLTPADIELLQKIKAGLPITADVSRADVLLCLPyD-KD-KAIVWFHAIPHSISSL--YRKDATGRILNAEEQPLLM 81  Caldilinea aero...
2YKH_A        87 ATFSGG-VPGREGAvgqqnSC---QHDGhsVEVSPVrFGD-QVVAVLTRHQpELAARRRSGHLETAYRLCA 152 Mycobacterium tuberculos...
Q187M1        86 KCLKTGeRVRDIKA-----LTqeyKLVK--QNIQPItLDD-KVLAVLIVEK-DISSEVKNEFNASEdeenk 147 Clostridioides difficile...
Q834L6        86 RTMQTSlNSIGLLA-----VTqenRLIK--QNIYPIrNEH-RTIGVIIVEI-AADEEIQADLQKEELNNCQ 147 Enterococcus faecalis
Q8Y7U7        87 RTLETGmNSNDLLA-----KTqenVLIR--QKVYPIrNKQ-RVIAVLILEN-DISAEIKAHFEIDNEETAY 148 Listeria monocytogenes
WP_012859568  87 RTLKTGiTSKKLKA-----FTqdkKSVY--ETVAPIpNSTgKIIGVLVSEH-DVTKQVNKNKQIKLLEQTQ 149 Sebaldella termitidis
WP_013360468  82 RTMDTGlTTRELKG-----ISqenIPIE--QSVTAIkNGD-KVVGTLIVEK-DATKDFAERRNIEILSETA 143 Acetoanaerobium
WP_011971395  84 RTLETGlASRDLKA-----LTqenKTVR--QSVEPIrNKEdQMIGVLIIEQ-DITKDIKRDKEMENLLQTA 146 Alkaliphilus metalliredi...
WP_014552465  86 RTMETGvGTRDLKA-----LTqenKKVK--QNVEPIkNKLgKVIGVLIMER-DITADIKKNKQMEILTETT 148 Halanaerobium praevalens
Q892C7        98 RTLQTGiPSRDIKA-----ITqenIIVK--QNVEPIkNEKdEVIAVIISEQ-DITEDLRESKKLKILAETN 160 Clostridium tetani
WP_014432253  82 QALKSGsGGRRQRE-----VLsngAPVI--QDVFPIhGQDnKVIGAMLVET-NMIAHERQRRRNRHFRqav 144 Caldilinea aerophila
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap