2YKF


Conserved Protein Domain Family
PdtaS_GAF

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pfam12282: PdtaS_GAF (This model is not part of the current CDD release)
Signal transduction histidine kinase
This domain is found in bacteria. This domain is about 150 amino acids in length. This domain is found associated with pfam07568, pfam08448, pfam02518. This domain has a single completely conserved residue P that may be functionally important. This family is mostly annotated as a histidine kinase involved in signal transduction but there is little published evidence to support this.
Statistics
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PSSM-Id: 492509
Aligned: 69 rows
Threshold Bit Score: 87.2877
Created: 21-Aug-2024
Updated: 4-Feb-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2YKF_A        11 AEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRD-DG-VLVCVAQCRPNTGPTV--VHTDAVGTVVAANSMPLVA 86  Mycobacterium t...
Q187M1        10 TAQTYLNNNEIEKIIEVSKSLDLMASFYEADVFIDVLSKfDD-EAIVVAHGRPKE-KSM--YCENVIGKKALIENEPGVI 85  Clostridioides ...
Q834L6         9 HQYTNLSESDIKELQRTARYLSSTTLYQSADVFIDVYKEmSQ-QALVVYHKPPAKTTSL--YSGDVVGMEALLKNEPGVL 85  Enterococcus fa...
Q8Y7U7        10 LRYTDLSEHDIDELIHTAQSLSVSAMYQDVDVFIDVYNKlTS-EALVIHHTPPKTTKSL--YKNKVVGETALRSNEPGVL 86  Listeria monocy...
WP_012859568  10 KKYTDLDDSDIAELEDYAKKLSVFAEFTDTDLFIDCLIPnSD-YAVVVYQQRPVDSPTL--FKNSVLGVIVGRETEPAVI 86  Sebaldella term...
WP_013360468   7 EKFTTLNESDIQLLYNVNEFLPLISQVTNGDVFIDCMTRePD-TAIVVAEAK--KKKSL--YKKNVVGEFALRENEPAVL 81  Acetoanaerobium
WP_011971395   7 KTYTQLSDSDILILENAKQMLPLISSAIRADVFIDCLTNiPN-TAIVVAEAKQSQKESM--YQHSVVGKFALGENEPAAL 83  Alkaliphilus me...
WP_014552465   7 QKETRLSEQDIEQLEKLAEQLPRIANLVKADVFIDCPIDdPD-ALLVVAEAKPRGAKAIsnYQGSVVGELAVRTNEPAAL 85  Halanaerobium p...
Q892C7        20 LKNTSLSESDIKIIQNISKTLQFVADSSKADVFIDCMTKnQKcAAVVVASAKTRDAKSF--YKEDVVGKLAIRKNEPAVL 97  Clostridium tetani
WP_014432253   6 siaAGLTPADIELLQKIKAGLPITADVSRADVLLCLPYD-KD-KAIVWFHAIPHSISSL--YRKDATGRILNAEEQPLLM 81  Caldilinea aero...
2YKF_A        87 ATFSGG-VPGREGAvgqqnSC---QHDGhsVEVSPV-RFgD-QVVAVLTrHQPELAARRRSGHLETAYRLCA 152 Mycobacterium tuberculo...
Q187M1        86 KCLKTGeRVRDIKA-----LTqeyKLVK--QNIQPItLD-D-KVLAVLI-VEKDISSEVKNEFNASEdeenk 147 Clostridioides difficil...
Q834L6        86 RTMQTSlNSIGLLA-----VTqenRLIK--QNIYPIrNE-H-RTIGVII-VEIAADEEIQADLQKEELNNCQ 147 Enterococcus faecalis
Q8Y7U7        87 RTLETGmNSNDLLA-----KTqenVLIR--QKVYPIrNK-Q-RVIAVLI-LENDISAEIKAHFEIDNEETAY 148 Listeria monocytogenes
WP_012859568  87 RTLKTGiTSKKLKA-----FTqdkKSVY--ETVAPIpNS-TgKIIGVLV-SEHDVTKQVNKNKQIKLLEQTQ 149 Sebaldella termitidis
WP_013360468  82 RTMDTGlTTRELKG-----ISqenIPIE--QSVTAIkNG-D-KVVGTLI-VEKDATKDFAERRNIEILSETA 143 Acetoanaerobium
WP_011971395  84 RTLETGlASRDLKA-----LTqenKTVR--QSVEPIrNK-EdQMIGVLI-IEQDITKDIKRDKEMENLLQTA 146 Alkaliphilus metallired...
WP_014552465  86 RTMETGvGTRDLKA-----LTqenKKVK--QNVEPIkNK-LgKVIGVLI-MERDITADIKKNKQMEILTETT 148 Halanaerobium praevalens
Q892C7        98 RTLQTGiPSRDIKA-----ITqenIIVK--QNVEPIkNE-KdEVIAVII-SEQDITEDLRESKKLKILAETN 160 Clostridium tetani
WP_014432253  82 QALKSGsGGRRQRE-----VLsngAPVI--QDVFPIhGQ-DnKVIGAML-VETNMIAHERQRRRNRHFRqav 144 Caldilinea aerophila
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