Conserved Protein Domain Family
CAF1A_dimeriz

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pfam12253: CAF1A_dimeriz (This model is not part of the current CDD release)
Chromatin assembly factor 1 subunit A dimerization domain
The CAF-1 or chromatin assembly factor-1 consists of three subunits, and this is the largest, known as A/p150, which is uniquely required for the progression of S phase in mouse cells, independently of its ability to promote histone deposition but dependent on its ability to interact with HP1 (heterochromatin protein 1)-rich heterochromatin domains next to centromeres that are crucial for chromosome segregation during mitosis. It contains a HP1-CAF-1 interaction module that functions as a built-in replication control for heterochromatin, which, like a control barrier, has an impact on S-phase progression in addition to DNA-based checkpoints. p150 plays a key role in embryonic differentiation. This entry represents the dimerization domain of p150.
Statistics
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PSSM-Id: 520163
Aligned: 122 rows
Threshold Bit Score: 32.099
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003711086 363 KYLRFFQDVRPAYYGTVT-----SlppslasydksstttlhaarlrklARKPISRQVLPLQYDYDSEAEWVD------DG 431
XP_003685166 349 KYIKFYENVRPPYMGTYSkdiiiP------------------------ANNPFTTEGTGYSYDYDSDLEWVNeed-eeG- 402
XP_001642379 331 KYIKFYENVRPPYIGTYSkdiviP------------------------VDNPFTQEGTGYNYDYDSDLEWVEed--eeG- 383
XP_022465419 346 KFIKFYENVRPPFVGTYSkdvvlP------------------------VNNPCSKENTGYNYDYDTDLEWVNeeaedgDS 401
XP_003675775 397 KYIKFYENVRPPFIGTYSknvmlP------------------------KDDPFSKEGTGYNYEYDSDMEWVNeeeedgDG 452
XP_003956439 370 KYIKFYENVRPPFIGTYSkicvlP------------------------TENPFETEGTGFDYDYDSDLEWVNeed-eeG- 423
XP_003648452 339 RFIKFYENVRPPYVGTYSktvilP------------------------RDNPFSTDGTGFNYDYDSDLDWINed--deG- 391
Q75AE5       327 KYIKFYENIRPPYIGTYSknvtlP------------------------RCNPFSTEETGFNYDYDSDLDWINded-eeG- 380 Eremothecium go...
Q6CSC8       335 KFIKFYENVRPPYVGTYSkkltlP------------------------NNNPFSTEGTGFDYGYDSDLDWVNee--eeE- 387 Kluyveromyces l...
XP_002556253 317 KFIKFYENVRPPYIGTYSkfvdmP------------------------RDNPFTIELTGFDYDYDSDWDWVDeee-eeG- 370
XP_003711086 432 DG-EDIEGDDDDDDDDEDDD-ED 452
XP_003685166 403 GEiDDLESG--EEDEEEEDDeAS 423
XP_001642379 384 ADaENLESGEEDEEDDDEEEeAS 406
XP_022465419 402 ADvENLESGEDDDDEDEEDDdES 424
XP_003675775 453 GGiDNLESGEEDDDDDDDDDeDE 475
XP_003956439 424 AGiDNLESG-EEDDEEDDEDdPS 445
XP_003648452 392 GDiDDLENDEDDEDEDDEGDeGD 414
Q75AE5       381 GDvDDLEADDDDDDDDDDEQdQG 403 Eremothecium gossypii
Q6CSC8       388 GGvDDLENDEDEEDEDQEDEeGG 410 Kluyveromyces lactis
XP_002556253 371 GGvDDLEDGDEEEDDDDEPEeGT 393
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