Conserved Protein Domain Family
HflK_N

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pfam12221: HflK_N 
Bacterial membrane protein N terminal
This domain is found in bacteria. This domain is typically between 65 to 81 amino acids in length. This domain is found associated with pfam01145. This domain is the N terminal of the bacterial membrane protein HflK. HflK complexes with HflC to form a membrane protease which is modulated by the GTPase HflX. The N terminal domain of HflK is the membrane spanning region which anchors the protein in the bacterial membrane.
Statistics
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PSSM-Id: 403438
View PSSM: pfam12221
Aligned: 91 rows
Threshold Bit Score: 33.0292
Threshold Setting Gi: 123149275
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Pnuc_1284          10 SVND---------------------PG------WGnnpntggskdakdgqgseqapkvdpdpatspnkqpsGQPSKPDGP 62  Polynu...
Q1QJU0                  2 PWKNqsgg--------------pwgSGpk--gpWGsg----------------------------------pQPAGGPKP 31  Nitrob...
WP_012113687            2 SWKNqsgg--------------pwgNGpr--gpWGsg----------------------------------pS-SSGPTP 30  Xantho...
jgi:Snov_3103           2 SWKNqsgg--------------pwgGGpr--gpWGtg----------------------------------pQ-SSGPNS 30  Starke...
Q211Y2                  2 PWKNqggg--------------pwgSGpk--gpWGsg----------------------------------pQ-STGPRP 30  Rhodop...
WP_012029157            2 AWKNqggg--------------pwgPGpk--gpWGsgp-----------------------------------qpVGPRP 30  Bradyr...
WP_014889884            6 PWSDqggprnq--------nnnpwgQPgg---pWGq--------------------------------------gSGGQP 36  Methyl...
CCB67098                2 PWSSqggsgsgggnggrkggggpwgQg-----pWGpq----------------------------------gGGGGGKEP 42  Hyphom...
TriplettUF:B488_06360   2 PWSN---------------------QSgdnggpWGsh--------------------------------kpSNPHGNVSQ 28  Liberi...
Q31GN8                  2 AWNE---------------------PGkpgqdpWGnsgng--------------------------nrpndSRKPNGPND 34  Hydrog...
jgi:Pnuc_1284          63 PDLDELWRDFNDRLAGI---FGGK 83  Polynucleobacter asymbioticus QLW-P1DMWA-1
Q1QJU0                 32 PDLEDLLRRAQERLRQL---LPGG 52  Nitrobacter hamburgensis X14
WP_012113687           31 PDLEDLIRRSQDRLRTM---IPGS 51  Xanthobacter autotrophicus
jgi:Snov_3103          31 PDLEELIRRGQERLRSA---MPGG 51  Starkeya novella DSM 506
Q211Y2                 31 PDLEDLLRRGQDRLQQM---LPGG 51  Rhodopseudomonas palustris BisB18
WP_012029157           31 PDLEDLLRRGQDRLQQF---IPGG 51  Bradyrhizobium sp. ORS 278
WP_014889884           37 PDLEEMLRRSQEGLKQI---LPSG 57  Methylocystis sp. SC2
CCB67098               43 PDLDEILRRGQDRMRQV---MRGG 63  Hyphomicrobium sp. MC1
TriplettUF:B488_06360  29 QDLEKIIKSIKNQFKQI---FPfg 49  Liberibacter crescens BT-1
Q31GN8                 35 PDLQEILKKAQDFLGGSndkFGGG 58  Hydrogenovibrio crunogenus XCL-2
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