1V0F


Conserved Protein Domain Family
End_tail_spike

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pfam12219: End_tail_spike 
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Catalytic domain of bacteriophage endosialidase
This domain family is found in bacteria and viruses, and is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. This domain is the C terminal domain of the bacteriophage protein endosialidase. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfill the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerize the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle.
Statistics
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PSSM-Id: 152654
Aligned: 5 rows
Threshold Bit Score: 262.104
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1V0F_E       512 PDNRVSRDFRYGAVPNRAVPVFFDTNGVRTVPAPMEFTG-----DLGLGHVTIRASTSSNIRSEVLMEGEYGFIGKSIPT 586  Escherichia ph...
1_pfamImport   1 NDSRVSRKFTYGATPGQAIPTFMGTDGIRTIPAPLHLSGevvaaDMTVEHLTLKASTSANIRSEMLMEREYGFIGKTIPK 80  
P49714       546 NDNRVSRKFTYGATPGQAIPTFMGTDGIRNIPAPLYFSDnivteDTKVGHLTLKASTSANIRSEMQMEGEYGFIGKSVPK 625  Vectrevirus K1E
2_pfamImport   1 QEEFVSRDFVYGATPNRTLPTFMSTSGVRTVPVPVDFTD-----DVAVQSLTVHAGTSGQVRAEVKLEGNYAIIAKKVPS 75  
O80102       694 DHPYVSRDFKYGATPNRTIPVAMGVDGVRHVEAPLTFDNdvsvySLHVTGLEYDGTQQSAVRAR--FDGDYGLISKTVPT 771  Phage #D
1V0F_E       587 DNPAGQRIIFCGGEGTSSTTGAQITLYGANNTDSRRIVYNGDEHLFQSADVKPYNDNVTALGGPSNRFTTAYLGSNPIVT 666  Escherichia ph...
1_pfamImport  81 DNPTAQRVIISGGGGTAADTGAQITLHGAGSSTSRRAVYNANEHLFQSGAIMPYNDNVYPAGGPRNRFTTIHLTSDPIIT 160 
P49714       626 DKPTGQRLIICGGEGTSSSSGAQITLHGSNSSNAKRITYNGNEHLFQGAPIMPAVDNQFAAGGPSNRFTTIYLGSDPVTT 705  Vectrevirus K1E
2_pfamImport  76 DDVTAQRLIVSGGETTSSADGAMITLHGSRSSTPRRAVYNALEHLFENGDVKPYLDNVNALGGPGNRFSIVYLGSNPVVT 155 
O80102       772 KTPSRQRLIVSGGDGASSSDGALLQLYGSNHATPNRAIMYASGGFYSYNNFLPYLDSQVSLGSASNRWTTVYATTGTINT 851  Phage #D
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