3FDQ


Conserved Protein Domain Family
MogR_DNAbind

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pfam12181: MogR_DNAbind 
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DNA binding domain of the motility gene repressor (MogR)
This domain family is found in bacteria, and is approximately 150 amino acids in length. MogR is involved in repression of transcription of the flagellar gene in Listeria bacteria. This allows a phenotypical switch from an extracellular bacterium to an intracellular pathogen. MogR binds AT rich flagellar gene promoter regions upstream of the flagellar gene. These regions follow the pattern 5'-TTTTNNNNNAAAA-3'. This domain is the DNA binding domain of MogR.
Statistics
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PSSM-Id: 403419
View PSSM: pfam12181
Aligned: 2 rows
Threshold Bit Score: 224.592
Threshold Setting Gi: 238828181
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3FDQ_B   9 LLQEIKkqvDNPGNSS--TTEIKKMASEAGIDEQTAEEIYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQI 86  Listeria monocytogenes
Q81SG3  12 LLQNMS---NNKMNDMqlEAEFKKIEKQFQVKYEELVDLYNRMVLFQIDIEKHGGMRAYEKSAITWLKSELELLYEVYQF 88  Bacillus anthracis
3FDQ_B  87 AILEDMKVLDISEMLSLNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQK------NTKKE 151 Listeria monocytogenes
Q81SG3  89 SQRHGLNIINISKYVSKKELNLFPKTESQLQNTYYKLKKCEIPFENIEKQKPGRKRKYTPvkepivEIKKE 159 Bacillus anthracis
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