2AYA


Conserved Protein Domain Family
DNA_pol3_tau_5

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pfam12170: DNA_pol3_tau_5 (This model is not part of the current CDD release)
DNA polymerase III tau subunit V interacting with alpha
This domain family is found in bacteria, and is approximately 140 amino acids in length. The family is found in association with pfam00004. Domains I-III are shared between the tau and the gamma subunits, while most of the DnaB-binding Domain IV and all of the alpha-interacting Domain V are unique to tau. The extreme C-terminal region of this domain 5 is the part which interacts with the alpha subunit of the DNA polymerase III holoenzyme.
Statistics
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PSSM-Id: 520108
Aligned: 18 rows
Threshold Bit Score: 135.149
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2AYA_A         1 MKALEHEKTPELAAKLAAEAI---ERDPWAAQVSQLS--LPKLVEQVALNAWKEESD-NAVCLHLRSSQRHLNNRGAQQK 74  Escherichia coli
WP_012072716 553 AILKEKTPELVKKVIALAEER---DDWTKTVEHLGLDhlKLVKQIALNSVILAQTDSeIVLGLRSNQKHLQRESAIEALQ 629 Actinobacillus ...
Q7VKQ3       543 AILQDKTPELVAKTIELACEQ---DQWCQIINTLNLS--SFSRQIALNSYLAQTTAQqLDLVLKPSMSHLDNEESRKSLT 617 [Haemophilus] d...
WP_012621502 527 AILQERTPELVKKTIELGCER---DKWSRIVNSLKLG--GVSRQLALNSYLESHNNNhLLLVLNPTMAHLNSNEATQSLY 601 Glaesserella pa...
Q9CNR3       571 rLEQEITPELRAKVIDIARKQ---DFWTDCVESLDIQ--NLTKELALNCILLSHDGEvFHLGVRDNKAHLHTTNAQQQLQ 645 Pasteurella mul...
P43746       545 aILKDITPELRLKIITQTQQQ---DQWADIVERSGLT--GFSKELALNCFLQSKTDDeINLGLHSEKSHLRQDRSIKNLA 619 Haemophilus inf...
WP_011706068 701 gdnqpqaGEVAARLIPSSLLNscgDPWAELIARTGVG--GRLRQLAINSVMSQ-QGDkVLLTLKPEQRHLISDRARADLA 777 Aeromonas hydro...
Q87MQ2       570 ALEHEKTPEMAQKLIDESLEQ---NEWAKMISLMNLP--KLVEQLALNSHYSK-EGStVSLQLRSSQAHLNTDRAQSELL 643 Vibrio parahaem...
Q9KT51       551 ALEHEKTPEMGAKLIEEAVAQ---DAWSALVQRLETA--KMVEQLALNSAFVR-QGDqISLTLRPSHAHLHNEKAQQELE 624 Vibrio cholerae
Q5E464       567 ALEHEKTPEMVKLLVEESSKQ---DTWSALAMSLTLP--KLVQQLVLNSAFVE-QDNqVKLHLRAAQSHLNGDKANELIT 640 Aliivibrio fisc...
2AYA_A        75 LAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ 128 Escherichia coli
WP_012072716 630 AALKVYYGKDLRLKIELNDDERRPTPLDYRRQIYHELSERARQDLQADKKVKLL 683 Actinobacillus succinogenes
Q7VKQ3       618 LALA---DKGFTYKLVIGESAEHKTPLEIRRMIFEKLTLAAKQALNNDEKLMLL 668 [Haemophilus] ducreyi
WP_012621502 602 NALS---QQGFSSEMRIGESDEFQTPLEIRRVIFEQLTQEAKQALQADKKLKLL 652 Glaesserella parasuis
Q9CNR3       646 QALSQLQQQAMNVLISPTDSDNL-TPTEWYRQTYKALREKAQQALQQDEKLQLF 698 Pasteurella multocida
P43746       620 EALSKLQGKDIRLTINL-DDSNVTTPIEYRRNIYQALREKAQNELQKDSKLQIL 672 Haemophilus influenzae Rd KW20
WP_011706068 778 EIIGPELGQPVQVEVTLGNVPEQETPLEIEHRLYLGVREQVTRDLEQDPNVQFL 831 Aeromonas hydrophila
Q87MQ2       644 NALNTVLGEECHLSIEVGESGE--TPLELRDRLYQEKLQQALNSLENDPNVDFI 695 Vibrio parahaemolyticus
Q9KT51       625 QALNHVLGEACSLNITVGQEGE--TPLELRERLYQQKLTSALHSLQTDPNVQFI 676 Vibrio cholerae
Q5E464       641 QALTQTLNREVTVTIDISDEGT--TPLELREQMYQTKLQTAYQSLQQDPHVNFF 692 Aliivibrio fischeri ES114
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