2AYA


Conserved Protein Domain Family
DNA_pol3_tau_5

?
pfam12170: DNA_pol3_tau_5 (492422 is an unknown moldel)
DNA polymerase III tau subunit V interacting with alpha
This domain family is found in bacteria, and is approximately 140 amino acids in length. The family is found in association with pfam00004. Domains I-III are shared between the tau and the gamma subunits, while most of the DnaB-binding Domain IV and all of the alpha-interacting Domain V are unique to tau. The extreme C-terminal region of this domain 5 is the part which interacts with the alpha subunit of the DNA polymerase III holoenzyme.
Statistics
?
PSSM-Id: 492422
Aligned: 18 rows
Threshold Bit Score: 140.505
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2AYA_A         3 ALEHEKTPELAAKLAAEAIER---DPWAAQVSQLSLP--KLVEQVALNAWKEESDNA-VCLHLRSSQRHLNNRGAQQKLA 76  Escherichia coli
WP_012072716 553 AILKEKTPELVKKVIALAEER---DDWTKTVEHLGLDhlKLVKQIALNSVILAQTDSeIVLGLRSNQKHLQRESAIEALQ 629 Actinobacillus ...
Q7VKQ3       543 AILQDKTPELVAKTIELACEQ---DQWCQIINTLNLS--SFSRQIALNSYLAQTTAQqLDLVLKPSMSHLDNEESRKSLT 617 [Haemophilus] d...
WP_012621502 527 AILQERTPELVKKTIELGCER---DKWSRIVNSLKLG--GVSRQLALNSYLESHNNNhLLLVLNPTMAHLNSNEATQSLY 601 Glaesserella pa...
Q9CNR3       571 rLEQEITPELRAKVIDIARKQ---DFWTDCVESLDIQ--NLTKELALNCILLSHDGEvFHLGVRDNKAHLHTTNAQQQLQ 645 Pasteurella mul...
P43746       545 aILKDITPELRLKIITQTQQQ---DQWADIVERSGLT--GFSKELALNCFLQSKTDDeINLGLHSEKSHLRQDRSIKNLA 619 Haemophilus inf...
1_pfamImport   1 -------GEVAARLIPSSLLNscgDPWAELIARTGVG--GRLRQLAINSVMSQ-QGDkVLLTLKPEQRHLISDRARADLA 70 
Q87MQ2       570 ALEHEKTPEMAQKLIDESLEQ---NEWAKMISLMNLP--KLVEQLALNSHYSK-EGStVSLQLRSSQAHLNTDRAQSELL 643 Vibrio parahaem...
Q9KT51       551 ALEHEKTPEMGAKLIEEAVAQ---DAWSALVQRLETA--KMVEQLALNSAFVR-QGDqISLTLRPSHAHLHNEKAQQELE 624 Vibrio cholerae
Q5E464       567 ALEHEKTPEMVKLLVEESSKQ---DTWSALAMSLTLP--KLVQQLVLNSAFVE-QDNqVKLHLRAAQSHLNGDKANELIT 640 Aliivibrio fisc...
2AYA_A        77 EALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ 128 Escherichia coli
WP_012072716 630 AALKVYYGKDLRLKIELNDDERRPTPLDYRRQIYHELSERARQDLQADKKVK 681 Actinobacillus succinogenes
Q7VKQ3       618 LALA---DKGFTYKLVIGESAEHKTPLEIRRMIFEKLTLAAKQALNNDEKLM 666 [Haemophilus] ducreyi
WP_012621502 602 NALS---QQGFSSEMRIGESDEFQTPLEIRRVIFEQLTQEAKQALQADKKLK 650 Glaesserella parasuis
Q9CNR3       646 QALSQLQQQAMNVLISPTDSDNL-TPTEWYRQTYKALREKAQQALQQDEKLQ 696 Pasteurella multocida
P43746       620 EALSKLQGKDIRLTINL-DDSNVTTPIEYRRNIYQALREKAQNELQKDSKLQ 670 Haemophilus influenzae Rd KW20
1_pfamImport  71 EIIGPELGQPVQVEVTLGNVPEQETPLEIEHRLYLGVREQVTRDLEQDPNVQ 122
Q87MQ2       644 NALNTVLGEECHLSIEVGESGE--TPLELRDRLYQEKLQQALNSLENDPNVD 693 Vibrio parahaemolyticus
Q9KT51       625 QALNHVLGEACSLNITVGQEGE--TPLELRERLYQQKLTSALHSLQTDPNVQ 674 Vibrio cholerae
Q5E464       641 QALTQTLNREVTVTIDISDEGT--TPLELREQMYQTKLQTAYQSLQQDPHVN 690 Aliivibrio fischeri ES114
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap