Conserved Protein Domain Family
Arm-DNA-bind_2

?
pfam12167: Arm-DNA-bind_2 
Arm DNA-binding domain
This domain is found at the N-terminus of various phage integrases. The domain binds to DNA.
Statistics
?
PSSM-Id: 492419
Aligned: 16 rows
Threshold Bit Score: 83.1169
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q2L302        13 PRGVTIRelkDGPR-----VQIAFSYQGQQCRELLpPGKITKTFLEYAAGLRAEIRRKIADGTFSYKAYF----PHSP 81  Bordetella avium ...
2_pfamImport   1 PRGVSIRqweTGSA-----IRIIFSYRGVQCRETL-KLEPTKANLKYAERLRGEIINAIALGTFNYADYF----PDSK 68 
Q3IEL8        11 PPGVVIR---YNSKgeatsFQLTFTYKSVLCREKV-PFIPNKQGLKSAGFFLGQIKNEIAHDTFDYAKHF----PKSN 80  Pseudoalteromonas...
WP_012203540   1 MPGVIVR----DKY-----LQIDLRAHGFG-RERL-ELQPTPANIRHAERMRAEILGKIERGTFVLGDYF----PDSP 63  Delftia acidovorans
Q3IIE8         1 MAHIRIR---PNGR-----IQFDLHIYGQRFREGT-KLMATPVNIKKANATLKKINAEIDLDTFQYRDYF----PESK 65  Pseudoalteromonas...
Q6ALN4         3 RGTLYVR----HNR-----IWFDFRYMGERVRESS-GLVDTRENRQILRRQLDLIMAEIDNGVFSFGKRF----PRSR 66  Desulfotalea psyc...
WP_012531504  17 TGAIKRRk--GSKK-----LYVDFYYFGHRITRST-ELDDTPANERKVRAFLNRITERIENGTFKFAEAF----PGSS 82  Citrifermentans b...
Q12GK7         1 MGSIRRLe--SQGT-----LFMDFRYAGQRLREYT-MLPDMPANRKRLQKALDRIETDIALGTFDYEKTFgkplPQPE 70  Polaromonas sp. J...
P76056         5 PTGVEIR----GRY-----IRIWFMFRGKRCRETLkGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF----PQSS 69  Escherichia coli ...
Q8ZQI9        16 PTGVEKH----GDK-----LRICFHYKGRRVRENL-GVPDTPKNRKVAGELRASVCFAIKVGTFDYAAQF----PDSP 79  Salmonella enteri...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap