2MEM


Conserved Protein Domain Family
SLED

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pfam12140: SLED (This model is not part of the current CDD release)
SLED domain
The SLED (Scm-Like Embedded Domain) domain is a double-stranded DNA binding domain found in Scml2 which is a member of the Polycomb group of proteins involved in epigenetic gene silencing.
Statistics
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PSSM-Id: 520088
Aligned: 28 rows
Threshold Bit Score: 110.388
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2MEM_A         7 TVCVYVNKHGNFGPHLDPKRIQ-QLPDHFGPGPVNVVLRRIVQACVDCALETKTVFGYLKPDNrgg-------------- 71  human
2_pfamImport   1 SCSVFINHECKCGPFMDSSKLF-ELPKQLGPGLVQKVLKDTIQHLVNTAHDIQSVTTLMKKQGdst-------------- 65 
8_pfamImport   1 RACIYVNTTCWCGPYIDPRKLA-ELPHQFGPGPINKIYRECIQNLIDAALDQKQIFNMIRQGSsk--------------- 64 
1_pfamImport   1 NVTIYVNHNCTCGPYFDPRKVK-AMPAQFGTGPILNVTRDIFQAFLMAAMSPRQMLSLLKRGEge--------------- 64 
XP_009022443 466 CSKIYFNTTCYSGPYLHKSRLN-VLPKSVGPGPVINVMITVLTKLIGCAYKSSRVLRELQLEGpaksn---------mhh 535
EDO43075       6 KFAVYINKSCSTGPLLDPNKVA-SLTTSY-HGTLPVVIKEVMESLINCSYNKKEAFKCLPQGNgr--------------- 68 
XP_009029412 347 TITVYVNPGCYCGPTLIPALIKsEMPSQFGPIPIRRGLQQILQCLMACSRDQQVIFNLLESGNgrvviqgrsfddcdwli 426
XP_020301906 477 KMTVYLNRGCRCTPILNASLVR-KLPEKFGPGTLHHILRETVQQIINCAVDPSFVFKKIDPGNlri-------------- 541
XP_015791934 561 LVTVHLNKSCKTGPWINAKKLE-KLPNVFGPDSYNRTLKGIIQSMLDCSPHPGKLISLVKSGHgy--------------- 624
XP_002070311 406 PVTAHFHPNCKGGPFINSS----KLPSMVTGPTHQTLAKLCLQEVLAASTDNQQLSKLLFALEgdv-------------- 467
2MEM_A        72 evITASFDGETHSIQLPP---VNSASFALRFLENFCHSLQ-CDNLLSSQ 116 human
2_pfamImport  66 ctITATYEGKSRVFKLPK---IEKTDEFWDYIRTLLEDLScCKNLLSPA 111
8_pfamImport  65 siVTGTFENKTVTCSLPN---LSKESEMWSMLNVLSEEMLgCSNFFSQS 110
1_pfamImport  65 -tISLILESKPTSVRLPI---FMEEEDFYTYIRRQLEDLCaCEHMLFRR 109
XP_009022443 536 qvLRTRYKMKNYSATVDI---CMRSNQIDSYCRDVCRRLLcCPNLISTH 581
EDO43075      69 irISTCYEGKELGCFLRT---VDRRAKFWQNIVEFLDELGcCENLVTEA 114
XP_009029412 427 gwLASNINGEVRQKQLKV---IRKSATCHMFLNYLLTRLGcCSGLLTPT 472
XP_020301906 542 lsVTAEIHGVTHVRAIPA---LKTLASAWDYLHAFISKLNvCRNFLTEE 587
XP_015791934 625 tsVSVNIAGSRETVTLPH---INRASVFWSYLSNFLEVVEaCPLLLVQK 670
XP_002070311 468 hiVTAAG--KNFTVKIPSplrMKDDESLAQFIETLCTTCRaCANLISLV 514
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