Conserved Protein Domain Family
Period_C

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pfam12114: Period_C (This model is not part of the current CDD release)
Period protein 2/3C-terminal region
This domain is found in eukaryotes. This domain is typically between 164 to 200 amino acids in length. This domain is found associated with pfam08447.
Statistics
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PSSM-Id: 520076
Aligned: 21 rows
Threshold Bit Score: 105.992
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_014331377 1259 HSDGNSSSCDLLDILLqeQEDAHSGTGSATSgsm----gsGLGSGSASGSGSNdcqtsaSGASGSRTgsSNTSKYFGSID 1334
XP_008104509 1078 NSDTFSVSSDLLDILL--QEDG------SSSrs------gVSAATESLGSGSNgcgmsgSGTGGSET--SNTSKYFGSID 1141
XP_049535179 1549 DDMDESSFSSFYSSFL--KTDN------------------SSTEGGHNGTEKK----------------DSSEMCWESSS 1592
EFN81588      760 SKKVLSPGELFSSCVS--NDGGCSSV--------------VDLLTPVIMKGHRptdyngDESSSSSF---YSSFLYKSSD 820 
XP_014342834 1100 NQDNQSTSSELLDLLL--HEDSQSGTGSATSgs------rSAESSGSNGSRSNri--sgSGTES-----SNSLEYFASND 1164
XP_007236105 1176 NQDAMSTSSDLLDLLL--QEDSRSGTGSAASgs-----gsSGSGSGSSGSGSNgcstsgSGTRS-----SNTSKYFGSID 1243
XP_007242118 1149 NQDAMSTSSDLLDLLL--QEDSRSGTGSAASgsgssgtrsSGSGSGSSGSGSNgcsssgSGTRSSQS--SHTSKYFGSID 1224
XP_007669911 1108 NSDALSMPSDFLDLLL--NEDVCSGTGSASTgs------aVSAASESLGSGSNvcdlsrSGTGSSET--SHTSKYFGSVD 1177
XP_006012250  989 NSDTHSTSSDLLDLLL--QEDSQSGTGSALSgs------gGSLVSGSMGSGSNgcdmsgSGTGSSQT--SNTSKYFESID 1058 coelacanth
XP_056675939 1072 SSDALSVSSDFLDILL--AEDGRSAS----Sgs------gASAASESLGSGSLgcgtsgTGTGGSET--SRTSKYFGSVD 1137 gray short-ta...
XP_014331377 1335 SLEH-----DPKGKGKTRneggsessksaQGEGEHL-IKYVL---------QEPLWLLMANADDKVMMTYQMPSRDIQRV 1399
XP_008104509 1142 SSEN-----NHKTKV-PE-----------VEESEQF-VKYVL---------QDPIWLLMANTDDAVMMTYQIPSRNLEAV 1194
XP_049535179 1593 NNANtghepEDKNRGGCG-----------RGGNSDGmVRPGTgdicrakrrPNPPWLDNVCQTKDLIYRYQINERSLEEL 1661
EFN81588      821 SSCN-------PDQKTCE-----------VSSEEH--TKCHQgm-----rrRDPPWLEGVQLTPELIYEYQMHPKTLNEV 875 
XP_014342834 1165 SSDT-----SQKEKKSSE-----------AKGEDKV-FKKCM---------GSSIWTMIESTPEAVMMTYQIPARDQKTV 1218
XP_007236105 1244 SSEN-----DHGHKQASG-----------DSGEEQF-IKYVL---------QDPIWLVMANTDEKVMMTYQMPKRDRDTV 1297
XP_007242118 1225 SSEN-----DHSRKQTAG-----------GDGEAQF-IKCVL---------QDPIWLLMADTDEKVMMTYQLPIRDRETV 1278
XP_007669911 1178 SSEN-----NHKVKMITD-----------KEEREHF-IKYVL---------QDPIWLLMANADETVMMTYQIPSRNLEAV 1231
XP_006012250 1059 SSEV-----DHKSLLKKG-----------MEESEHF-IKYVL---------QDPIWLLMANTDDSVMMTYQIPSRDLETV 1112 coelacanth
XP_056675939 1138 SSEN-----DQGVRADPR-----------LGEGERL-MRSVL---------QDPIWLLMAGADQDVMMTYQvpprnpeAV 1191 gray short-ta...
XP_014331377 1400 LREDKERLRQMQKSQPHFTSEQRRELVEEHPWMRRGGLPAAINVKEC 1446
XP_008104509 1195 LKEDKLKLKQMQKFQPKFTEDQKRELLEVYPLIQKGGLPEMVANSLC 1241
XP_049535179 1662 LDSDSLALKKIS--QPILVNDQLGQL---YLDLELEGLSAKLSLSEA 1703
EFN81588      876 LKADMDAMKNFN--QPLLVNDQLGQL---YLDLEVEGFGTELVLEEG 917 
XP_014342834 1219 LKEDLEKLLAMQTMQPCFTENQKKELAEVHPWILKHVVPKERDMQSC 1265
XP_007236105 1298 LREDRELMKTAKMQQPHFTEKQKKELSQVHPWIQTGCLPKAINITSC 1344
XP_007242118 1279 LHEDRIALRAMQKHQPRFTDEQKRELSQVHPWIRTGRLPRAINISTC 1325
XP_007669911 1232 LKEDREKLKRMQKFQPKFTEEQKRELNEVHSWIQKGGLPKAVNVSEC 1278
XP_006012250 1113 LKEDREKLKRMQKLQPKFTEEQKKELVEAHPWIKKGGLPKAIDITEC 1159 coelacanth
XP_056675939 1192 LKEDRERLKLMQKFQPRFGDEQKRELHEVHTWMPRGALPRALDLVec 1238 gray short-tailed opossum
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