7F60


Conserved Protein Domain Family
Nup96

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pfam12110: Nup96 (This model is not part of the current CDD release)
Nuclear protein 96
Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the nuclear pore complex between the inner and outer nuclear membranes. Nup96 is predicted to be an alpha helical solenoid. The interaction between Nup96 and Sec13 is the point of curvature in the heptameric complex.
Statistics
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PSSM-Id: 520074
Aligned: 114 rows
Threshold Bit Score: 170.847
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7F60_C        1332 EAVFSYLTGKRISEACSLAQQSGDHRLALLLSQF------VG--SQSV-RELLTMQLVDWHQLQAdsFIQDERLRIFALL 1402 human
XP_002180245  1264 LAIFAALAGGDVDKACIVAISSGLNNLAAILA------------SGSEgRKDVLLSVSKLAESNHasSVPAELIRLMKES 1331
4_pfamImport     1 RRVLELLSVRLVHDAAVAAMAAGLPRLAVMLTAVatqgggGGrpPARYgSKFLAQQAAQWQAAGAdaRMPQEAFSVVQLL 80  
XP_003061415   254 NAAAAHAAAGRSSRSVASAAANRDPRLATLLAQA------NA--GGDL-RALTAAQLDLWRGSPVekYLTRETSSAFALL 324 
XP_001420436   128 RAALTHVAGGRTVSAARAAAAHGDPRLATCLAQI------GA--GKNV-AFYAKQQLTRWRAGSVgkYIDEFSEQAFKLL 198 
14_pfamImport    1 KGVLSLLCQHRIVEAADMAMDCGGWRLATLIAQA------ASyeGTDF-RRMMVKQMEEWNENGSlhCMDKSLVFVYSVL 73  
XP_002901259  1575 EGVLRLLCQHRVAEASEMALECGDFRLATLLAQA------ASyeGNAF-RNLMETQMAQWSENGSleFMDKTLVLIYSIL 1647
XP_067741622  1573 EGVLRLLCQHRIAEASDMAMDCGDFRLATLIAQA------ASyeGNDF-RSLMETQMAQWSENGTleLMDKTLVLVYSVL 1645
XP_001750473  2354 QNVLRALLVHDLESAASLASSQKDHHLSLLIAQA------GG--ANKM-RSWLLNQLQDWQQRAAddFIHPLRLRIYAVL 2424
XP_004997339  1534 KQLLAHIHRHDLAAAVDLACQFKDHRLAMHLSQL------DE--GQRC-APLLRDQLVDWDERAAsnRIHPLRRRVYALL 1604
7F60_C        1403 ------------------AGKP-----VWQlsekkqinvcsQLD-------WKRSLAIHLWYLLPPTAS----------- 1441 human
XP_002180245  1332 ------------------GGDVhsectLYKqg-------ssSLD-------WKRRLALRLLQDSDKS------------- 1366
4_pfamImport    81 gregfrdvglrgliskgpGGSLr-----------------pSLD-------WMRQLGLCLWFGAGASAGiggedgdrdgg 136 
XP_003061415   325 ------------------AGEVs-----------------pPEDvvrgvgaWPQNFGLTQWFASPPTTT----------- 358 
XP_001420436   199 ------------------AGEVerd--------------ddGMG-------WYQNLGLHMWLAAGPTSP----------- 228 
14_pfamImport   74 ------------------SGSV-----EVLsar-----qgaSMS-------WVTCLALFLWYKRGPALS----------- 107 
XP_002901259  1648 ------------------AGSV-----EVLtaq-----kgfSMS-------WIACLALFLWYKRGPATS----------- 1681
XP_067741622  1646 ------------------AGSI-----EVLsaq-----kgaSMS-------WIDCLALCLWYKRGPATS----------- 1679
XP_001750473  2425 ------------------AGAMiwpdqaq-----trlptcqGLP-------WLAALAVHHWYAVSSTAT----------- 2463
XP_004997339  1605 ------------------AGCStwpdtphrh-egnriytleGLT-------WKQTLTTFLTYLGPSS------------- 1645
7F60_C        1442 ----ISRALSMYEE-A--FQntsdSDRYAc-----S-----------PLPsylegsg----------------------- 1475 human
XP_002180245  1367 ----LVQLLCQYEN-D--IS----SNHAP------P-----------PNLphsqq------------------------- 1393
4_pfamImport   137 gggvVANAIEAYDT-L--VA----DGEAL------S-----------PTAryflepthhesahldkvcaelrrvympppp 192 
XP_003061415   359 ----LSAVVEGYLE-A--VA----RGEAA------Y-----------PDApgliavd----------------------- 387 
XP_001420436   229 ----LRDVVKNYLD-A--VA----QQRAA------N-----------PLPpvatyeald--------------------- 259 
14_pfamImport  108 ----LKSAVTLYEE-S--VS----KQLAS------P-----------PMSrfava------------------------- 134 
XP_002901259  1682 ----LKSVMALYED-A--VR----KQLAS------T-----------PLSkfapv------------------------- 1708
XP_067741622  1680 ----LKSAMALYEE-A--VG----KQLAS------V-----------SLSkfaaa------------------------- 1706
XP_001750473  2464 ----VADSIRSYARsAfnLL----SGRSK------SgaavqtfeaaaPSPsyldpealqaqqml---------------- 2513
XP_004997339  1646 ----LGAVLDTYEE-AtrVW----LTDQKggrviaR-----------PPVvahqshcvtlsspn---------------- 1689
7F60_C        1476 --------cviaeeqNSQTPLrDVCFHLLKLY----------SD-R-----HYDLNQ--LLEPRSI-T--ADPLDYRLSW 1526 human
XP_002180245  1394 ------------------tdmrSLTFQLLKSY----------SV-Pq----SMEVSD--VVHPLGF-S--SMSHDFSLVF 1435
4_pfamImport   193 ppaglsleksggedrGSGRDR-CVLRCLLAMYpsrkagggvgGA-S-----GVSLLS--ALEPMAV-T--PDVMDYRHSW 260 
XP_003061415   388 ---------------adarrlkDASFNLLILG----------SK-GptapsDADVRD--AFHPLTYcA--RDLGNVSLAW 437 
XP_001420436   260 --------------anqathlrDVAFNILALAastedeggspS--------TAEVRV--AFHPLTY-S--DDVLNASLAW 312 
14_pfamImport  135 -----------------gtkkeDVLMELMKLY----------IE-D-----VASLCK--VLSPSGYmTqgLFHLDYELSW 179 
XP_002901259  1709 -----------------dtdkdDVLMELMKLY----------IE-D-----AASLCK--VLSPSGFmSqgTHHLDYELSW 1753
XP_067741622  1707 -----------------gtnkdDLLMELMKLY----------IE-D-----VSSLCK--VLSPSGFmShgSRHLDYELSW 1751
XP_001750473  2514 -gmqkfddasgmpssNSDFFG-DLLFNIMQMF----------ACpS-----NVNMER--ALLGRTV-G--PDLDDLRLPC 2571
XP_004997339  1690 -mrmwtrdapesreaTRPERQ-DLLYCLLRLK----------AY-G-----GKDLAVkdLLNPLHH-T--ADEHDYRLSW 1748
7F60_C        1527 HLWEVLRa--lNYThlsAQCE-----GVLQASYAGQLESE--------------G--LWEWAIFVLLH--------ID-- 1573 human
XP_002180245  1436 HLTALICa--tGATkndSFKT-----EYILNSFEAQLIQA--------------G--RWDLAVIVCLSaigemsetLHhw 1492
4_pfamImport   261 HLMNVVEal-gVAEvqdRAKA-----AAVTEGLRFQLVAV--------------G--LWEWAVYVTL---------TAeg 309 
XP_003061415   438 HLFATLR----AIGalpETVEnralgDALHANFARQLLSSssssssetktrrqqRhsMIEWAVFVAMH--------VE-- 503 
XP_001420436   313 HLFGVLNaigvLEGegmDALA-----DEITVAFATQLLGMpe-----------rG--RCEWAVFVSQH--------LR-- 364 
14_pfamImport  180 HLHSVLRa---IGYkleRQWE-----SHIHQNFIRQLEGC--------------G--LWGDALYVALN--------IS-- 225 
XP_002901259  1754 HLHSFLRa---IGYkldREWE-----SHIHQNFIRQLEGA--------------G--LWEDAVYVALN--------IS-- 1799
XP_067741622  1752 HLHSVLRa---FGYkldRQWE-----SHIHQNFIRQLEGS--------------D--LWEDAIYVALN--------IS-- 1797
XP_001750473  2572 LAYLILRs--lGAPqlnAHAE-----AQLLTDFAAQLEGA--------------G--AWCHAVFVLLH--------LR-- 2618
XP_004997339  1749 LLFVLLRa---LGVvasFPTE-----RLLHVNFASQLEQM--------------G--CLSAALAVMQH--------ID-- 1794
7F60_C        1574 NSGIREKAVRELLTRHCQLlet---peSWAKETFLTQKLRVPAKWIHEAKAVR 1623 human
XP_002180245  1493 KAHR----AKSLICRFSSD---------NDGKRLFLEETGIPRRWFEEALAYR 1532
4_pfamImport   310 DPDRRAATARELVLRHGYRvlgapvnsPDAERGRFLEGLGIPGAWLHEAAAVR 362 
XP_003061415   504 DGARRRDLVKEILNAGCAEwc-----dDDAKTTFMRETLRVPEAWTREAKETW 551 
XP_001420436   365 DDTRRTKMTGHILRERFEEwk-----cDDGKIAFIKDVCAVPQESLDDAHALW 412 
14_pfamImport  226 DAAEREYTCRELLFRNADSls-----sNASVRKSLCKRLNIPAEWISEALAVR 273 
XP_002901259  1800 DVIERENTCRELLFRNADVla-----sDVAKRELLCERLTLPPEWISEALAVR 1847
XP_067741622  1798 NTIERENTCRELLFRNADAla-----sNVTKREELCERLNIPTEWVSEALAVR 1845
XP_001750473  2619 DDVPRTHAARTLVLRHLTAe------cREAERDFLKVELKVPETWLHEALAQD 2665
XP_004997339  1795 DDATRSLLVRRFIMRHHEL--------HAATDAGLLAQLRVCPAWFAESALVA 1839
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