2DT7


Conserved Protein Domain Family
SF3a60_bindingd
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pfam12108: SF3a60_bindingd (This model is not part of the current CDD release)
Splicing factor SF3a60 binding domain
This domain is found in eukaryotes. This domain is about 30 amino acids in length. This domain has a single completely conserved residue Y that may be functionally important. SF3a60 makes up the SF3a complex with SF3a66 and SF3a120. This domain is the binding site of SF3a60 for SF3a120. The SF3a complex is part of the spliceosome, a protein complex involved in splicing mRNA after transcription.
Links
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Statistics
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PSSM-Id: 520073
Aligned: 51 rows
Threshold Bit Score: 37.4166
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2DT7_A         5 AIS--GPNEFAEFYNRLKQIKEFHRKHPN 31  human
Q55CK7        75 SISgfGTDLYSSFYEKLREIKDYHRKFPN 103 Dictyostelium discoideum AX4
XP_009130918  80 TAT--GVNVYSAFYDRLKEIREYHRKYPS 106
Q9FG01        80 TAT--GTNVFSEFYDRLKEIREYHKRHPS 106 thale cress
CAL9756135    80 TASg-TTNLFSAFYDRLKEIRDYHRRHPA 107
XP_002968511  81 APG--QNNVFSAFYDRLKEIREYHRRHPS 107
XP_006852652  80 TAS--GQNVFSSFYDRLKEIREYHRKFPV 106
Q7R8D2        80 TNE--ENDVWKNYYERIKYIKDYHKK-TN 105 Plasmodium yoelii yoelii
XP_001032322  85 GTR--QPDIWYNFQQRLKDIKEYYKKHQN 111
XP_020429984  75 AISgqGPAIFSNFYDKLRELKDYHRKYPT 103
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