Conserved Protein Domain Family
DUF3560

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pfam12083: DUF3560 
Domain of unknown function (DUF3560)
This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.
Statistics
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PSSM-Id: 492357
Aligned: 12 rows
Threshold Bit Score: 106.7
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015333150   62 N----VQEWAARKAERYADWAGRAEARSDDAYKRSHSLVEGIPLGQPILVGHHSEKRHRRTLEDSWNAMGRSVELSKKAS 137  Fibrella aest...
WP_008765970   62 N----AQEWAKRRAERRRKWAASAVQRSNEYYNKSNKDKDFLSLGEPIKVGHHSEKRHRKAIDDAWNNMGKSVQFDEKAA 137  Bacteroides
WP_012621841   62 D----SQARATAKAQRYQEYADNAAKRSNQYCEAANEGRDFLSLAEPIKIGHHSEKRHRALIERNAKRMDKAVEEMKKAE 137  Glaesserella ...
1_pfamImport    1 N----RKERQEAKTGRYRELAEKAMKESKEAYSQSHKLVENIPMGQPVLIGHHSESTHRRILDRSWNTLGKAVKLSEKAE 76  
WP_015159275   28 NrrdrFESRRERRLDNAHRLGLKNRKLSKSFYERSTSMARCIPMGQPILVGHHSEKRDRRFRRRMWDVMGKSVAASDKAE 107  Chamaesiphon ...
WP_008505295    1 -mkhnFEERRNNRINYAHQRAAKSEAEADRLYNVSNDMASFIPLGQPILIGHHSEKRDRRYRERMRNVFGQSVAQRDKAA 79   Mucilaginibac...
WP_008504201    1 -mkhdFEERRERRINNAKNRAIKNENEANRLFKKSDEMASIIPPGQPILIGHHSEKRDRNYREKMRGTFRKGIECTDKAA 79   Mucilaginibac...
WP_011733773   71 S----LVDRAEQRAERFEDYSDRRAGDSQKATAHVKSIADGIPFGQPILVGHHSEKHARKHAEQIENGMRKAVKMWDQAK 146  Pelobacter pr...
WP_012735314   71 S----LSERAEARAERYAAASDRAEAQAQARRAAVDAIAEHIPLGQPILVGHHSEGRHRRDLARMDASIRQALTLWDKSE 146  Burkholderia ...
2_pfamImport    1 D----RVARSAARAERFQGYAGNAADRSAAAHATARRIADGIPLGQPILLGHHSQRRAERDRDRIWSNTEKGVKEADKAE 76  
Q0RM40         86 aaergRTLDAQDRAQRYDGYARSATSRADSREAAADRVLGGIPPGQPMLVDHYSYAADKRRRERAWSNQDRAAEERDKAQ 165  Frankia alni ...
WP_012607132  990 A----YEQKIEARKERYLALSEKTRARAKARMEQARRMADAIPFGQPILVGHHSEKRDRKFRERIHQNFGKGFDLLEKAA 1065 Acidithiobaci...
WP_015333150  138 SHEDKAAYWASRAAtINLSMPDSIDFYEHELEKAQAIHEGLKN 180  Fibrella aestuarina
WP_008765970  138 EHESKAEYWDKRANtINLSMPESIDFYEHKLEVAKEYHAGVKS 180  Bacteroides
WP_012621841  138 SYADKIAYWESMAEkIDLSMPESLEYFKHKLKEAEAKHSDLKK 180  Glaesserella parasuis
1_pfamImport   77 YFEQKAKAAENNAS-IYLGDDDAVERLEEKLATLGKKQETMKA 118 
WP_015159275  108 YYEQKAEAIESNQS-IFSDDPDAIEKLKEKIAAAIDRQDFMKA 149  Chamaesiphon minutus
WP_008505295   80 YYGEKAESIEHNNA-IFSDDPDALEKLTEKLKTLQELQEFMKA 121  Mucilaginibacter paludis
WP_008504201   80 YYTDKAESIASNNA-IFSDDPEAVEKLTEKLNNLKTAQEFMKA 121  Mucilaginibacter paludis
WP_011733773  147 YWTSRAAGALSHAK--YKERPDVRARRIKTIEADKRKQERTRK 187  Pelobacter propionicus
WP_012735314  147 YWQRRARAAIANAQ--YKERPDVRHRRIKRLEADLRARQRSKL 187  Burkholderia glumae
2_pfamImport   77 YLARRAAASASYEE--FRKNPGVTLRRIAKLEADLRRVHRQIA 117 
Q0RM40        166 YWQARQRAAERWPT--SRTNLDAMLRRVQWIEADMRRTRRRLA 206  Frankia alni ACN14a
WP_012607132 1066 YYERRAKGVNDYA--ISADDPDAVKKLRERVENLKSSQERMKA 1106 Acidithiobacillus
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