7CMG


Conserved Protein Domain Family
GldM_4th
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pfam12080: GldM_4th (This model is not part of the current CDD release)
GldM C-terminal domain
This domain is found in bacteria at the C-terminus of the GldM protein. This domain is typically between 169 to 182 amino acids in length. This domain has two completely conserved residues (Y and N) that may be functionally important. GldM, is named for the member from Cytophaga johnsonae (Flavobacterium johnsoniae), which is required for a type of rapid gliding motility found in certain members of the Bacteriodetes.
Links
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Statistics
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PSSM-Id: 520064
Aligned: 56 rows
Threshold Bit Score: 77.3284
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
7CMG_A         410 PDPLPYIEYkdvqgntkRFKGGRLGKREILAAGGIKAALDDDLLEVNYTVVKFQLVFYDSMGNSIPEVSDGASFSERQKR 489 Porphyromonas...
adrc:B739_0220 401 PAPQGEIR---------GQNVVSMPASSIKNQT-ISAAIPDFEFPVSFTVTGFRVK----IPGKAASFISGNSLSS-VAA 465
WP_014389297   406 PKPTGKIR---------GDVSPKGPKSSLEVST-VTAVMEDFDFPVTVNVVQFNLK----VPGQPTVVVQGNKMNAAALA 471 Flavobacteriu...
7_pfamImport     1 PAPTGKVR---------GEVSAKGSKSNLEVCT-VTAEMEDFDFPVDVRVTQFNVK----VPGQPTIVVTGNKMDARAKG 66 
6_pfamImport     1 PRPVGAIG---------GTDGIVKGAKSRLEVSQVSAKLPDFDFDVNLQVVGFTFK----ATGQAAVIVSGDRVNAQCKA 67 
2_pfamImport     1 PTPRAYIK---------GKSGGNVPLEWIEGAGAIETQLEDFVFDVKFRVVRFSATFINPRSDAVTIANNGGGFGGQIKG 71 
jgi:Halhy_1448 419 PDPVAKIN---------NSTGGEIGNGVLKAQGGVIPVLEGFDFDARCDILGYTVIYSPRRQDPLQAVNPGGAFGAQARN 489
WP_015691957   450 PDPIAILTN--------GKSDGTVKAGEMRVQRGLIAKLQNFDFDAQCKIQSFTMYYTPPRQDPVPAKNNGGTFSGTVLN 521 Saprospira gr...
WP_014681551   402 PPPTPKFA---------GLSTGRVSSAAAKAQPGVFAVLENFDFDMKFSVTGYTMYVVKKRTDPIFESVNGPALTARLRQ 472 Solitalea can...
WP_008508813   405 PDPKAQFA---------GKSGGSTSAVNLRSQDRLFAKLENFEFDAKFTIRSFKMIVAKPHQDGVVSSSSSGELSGTQRA 475 Mucilaginibac...

7CMG_A         490 QIQNLGKGKRFYVTEVIAr--GPDGIERKIP---AIEVIVN 525 Porphyromonas gingivalis ATCC 33277
adrc:B739_0220 466 QTANLRSGDVVYVYDIQAtasGLGGQMLKNIs--PVVINVQ 504
WP_014389297   472 AIKKAGKGDVVTISEIKAkftGIDQVPKQPS---PCTFEIQ 509 Flavobacterium indicum
7_pfamImport    67 AIQKAQRGDVVVISEIKAsfsGIDQVAKRVS---SCTYEVQ 104
6_pfamImport    68 AMAKSTRGDQITISDIKVk---VAGSPIMLPttaPVIYEIQ 105
2_pfamImport    72 ALNSIKPGATIIFKDIVCe--GPDGRQKVLD---GITFVAK 107
jgi:Halhy_1448 490 LINQAKPGDQFIFDNIRAkcpG-DAAGRKIN---NVAFKVQ 526
WP_015691957   522 SIRSAKPGGSFQFVDVKGrcpG-DAVGRKLN---GLAFQIR 558 Saprospira grandis
WP_014681551   473 ALASVTAGDKITIEDITVr--DPKGNSRRLSt--GVSLTVQ 509 Solitalea canadensis
WP_008508813   476 ALATITPGTTIYFDDITAv--GPDGAQRGLD---PIIFKAQ 511 Mucilaginibacter paludis
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