Conserved Protein Domain Family
DUF3549

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pfam12069: DUF3549 
Protein of unknown function (DUF3549)
This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 340 amino acids in length. This protein has a conserved LDE sequence motif.
Statistics
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PSSM-Id: 492345
Aligned: 23 rows
Threshold Bit Score: 394.709
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014703447   5 KISTLTSFFEQSGTKYRIFDMGRRVSKISSTDFARIENAALPYPMPFQRMAWLAIVFWAPGRPDQ---HYVWFLQLPLDE 81  Methylophaga fr...
Q5QXS6         5 TITTLGEFLQAGQAEYKIFDIGRCLTELSQEEFAAIEQQQRPYPYPIARQAQLAILFQHKQHDQQ---PFIWFLQFPLDE 81  Idiomarina loih...
WP_011705084   3 TINTLTEFLTQADTQFQLFDMGRQVRPLASDTFERIEQQQEPYPWPLQQHAWLGVHFFQ-PAESR---HYLWFLKFALDE 78  Aeromonas hydro...
WP_014291877   2 QIDTLSEFLTQAGTDFRLFDLGRRLQPLEQDDFVAIERGQRPYPWPLQRHAWLAVCYWQ-QQGGQ---PYVWFLKIPLDE 77  Oceanimonas sp....
Q87MD2         3 NIQTLTQLLKNSHCEYQIFDLGRRIKTIDSQLFADVEKGQCPYPYPMQRKAHLAIAYW--NEQKQ---PWIWFLKFELDE 77  Vibrio parahaem...
Q9KTL6         3 TIRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYW--NEQRQ---PWIWMLKFALDE 77  Vibrio cholerae
1_pfamImport   1 ---TISQLVQRSGAQMRVFDLGRRIGEISTTDFEAIELLAKPYPAPYLKHAWLGIFSWNPDKPGQ---HNIWFLKLPLDE 74 
WP_043107596   1 --mTLTEFLENTGATLRFYDLGRRVAPVTREDFLAFEHADRPWPTPMQQKAWLALVLTP-GDDRE---PLIWFLCFDLDE 74  endosymbiont of...
WP_013661633   3 QIESLSDLFNLVDCHVTYFDIGRRVQKLTPQQVIQFDKKQQAYPYPFQKHAWLACALLPKDSKNKaddSVIWFIRLPIDE 82  Marinomonas med...
WP_007643882   3 QINTISEFLLQAGTDYRVFDIARGIRPLASQLFLDIESATVPAPYPRQQHAWFGIVFFNNKMSNE---RYIWFVKLPIDE 79  Paraglaciecola ...
WP_014703447  82 QGLLLQVARDEFLVAVLDRVGESMLAAADGHRl--QGALKDSPYSFTPREEKMAAFNALATATLRLPPSPYFPAAKAYFT 159 Methylophaga fr...
Q5QXS6        82 RGLLNIAARNQYLEYVVNALGHEITGEMTEEQ---QKQLQQNPYLLTPNEQQRAALHARVQRQQKLSPSIHFETAEAYLK 158 Idiomarina loih...
WP_011705084  79 RGLLIASGPKHFMDQVVETLGYKLTGDLDEEK---AQRLAENPYTFRPAEAKMASLHAKLARQLEQAPSTYFEGLCHYLA 155 Aeromonas hydro...
WP_014291877  78 RGLFNNAAVKHFLSALVEQLGGDIHAPLTDAQ---QQRLADTPFTFQPPQDKLAAFHARLSLALDHAPSAYYQDTLNYLS 154 Oceanimonas sp....
Q87MD2        78 RGLLKQSDIGNFIKYVVEAMGTRLSEEMSEEQ---QQKLSNNPYTFKPSEDKMAVFHSQVRANLDLPTSQYYEHTQHYFT 154 Vibrio parahaem...
Q9KTL6        78 RGLLQQADVGQFIQYLLEAMGSRLHQSLTEEQ---QQKLANNPYTFKPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFS 154 Vibrio cholerae
1_pfamImport  75 QNVLLPGPRDAFLEHWLRVVQAP------------TKQHGDAPCSYKPDGNRMAYFHALALRTLEQPATQYYATARAYLS 142
WP_043107596  75 QGLLVQATRDYLLGRFAEIASEGPDPQTL------GEALRENPLAFAPREDKMANLHAQVHQALGLPPSQYHAHAHDYLA 148 endosymbiont of...
WP_013661633  83 KGALNLGTRDHFIKSIVDRILNK------GTEqglNEALEDNPYAFKPDQERMANFHAIMACALNQPSSLYYEDVKTYLS 156 Marinomonas med...
WP_007643882  80 QGLVIGAARQQFLQTVIEALGQTLDKQNNI-----NNQLPENPFTFVPNQQQLADFNSISRIELEMPLSEHLNLAEQYLT 154 Paraglaciecola ...
WP_014703447 160 GNAD--SQVWSELALQGVADVAVRLPETDDVA-DLIQTLPGLPATPFQTLARFLEQ----VAIPTSLVEAFIAQLsaalg 232 Methylophaga fr...
Q5QXS6       159 QPES--GIDWQQMGLQGLHDCAARLEQLPELSkAIATHFSHYPSAVRQPLAVALEQ----QSLTPPVRDALLQNL----- 227 Idiomarina loih...
WP_011705084 156 APTP---EGWQTLGVQGFADLAERLQDERNLA-LVCKALPKLPQEPLYALCQSLEN----APLPPAVQGALFERIgkeqe 227 Aeromonas hydro...
WP_014291877 155 HPGA---HDWQQLGLQGLADVAARLHTDAALAsSVQQRLWQLPAPVQQALLTQCEH----HPLPAPLARAMIDAIngele 227 Oceanimonas sp....
Q87MD2       155 GGLG--WENWQTVGLQGITDIAARLGKEQNAV-TLRKALNHLPNEPLYALLGALEH----VDLQERLAQRIAEKAqqeih 227 Vibrio parahaem...
Q9KTL6       155 GGLG--WDKWHTVGLQGITDLCARLEQEQNGV-LLRKALTHLPAQPLYAVLGALEH----VTLPEKLAKRLSELAeaevk 227 Vibrio cholerae
1_pfamImport 143 GDNG--WQNWQQLGLQGLAEVVARIDEDNNDV-LLCQAMPKMAAVPRNVLLGFLENatpgLNLTLAISDSLAQVVa---- 215
WP_043107596 149 GRLG--WDQWSFVGFQGLADIAARQHKDDDG--LLARAIPHLPPEPLIALCQCLEH----HVPGPGLDQALHARLrlald 220 endosymbiont of...
WP_013661633 157 QNLPdeDGTWSQLGLQGIADLAARHAEASTEA-LIANAIKRAPLPLSMALCNCLEH----HSLSSSLSSDIESIAt---- 227 Marinomonas med...
WP_007643882 155 EPER---HDWRAVPLQGISDFTASLPQHKGKR-LLLKQFSTLAPDMQYALCASLEN----HQIDEDISALLINWYq---- 222 Paraglaciecola ...
WP_014703447 233 eVDPDVNHVAACLRAISNTA----AQGLVAETVRKVLQHDcsrNVEILAVVSGRCWSTLAEPTIA-HLFCERLAINDagQ 307 Methylophaga fr...
Q5QXS6       228 -ESSNAQLCTDSLRALASAS----AHPRVKKAVNKLVPHA---NADQLVVIAARLWPVLCEEQNL-LRYLDAIAELD--N 296 Idiomarina loih...
WP_011705084 228 cAEPNAETLAYLCRALASCN----GSSMRTNKLLTLLQTQp--SPALLLAIAGRLWPDLKDAGLL-SLFLEQLALQP--T 298 Aeromonas hydro...
WP_014291877 228 rAEPDEARIALLLRATAGCA----PFRERSAKIASLLTQQp--SQPLLLTLAARLWQELTDEALL-LPYLTLLAERH--G 298 Oceanimonas sp....
Q87MD2       228 sPEPDLFLLSALTRALAGAP-----TEISLPVLEAILQSPrlsHQEVLIGIAGRAWHLLSDAKIA-EQFLLRLAQTGn-Q 300 Vibrio parahaem...
Q9KTL6       228 aSDPDLFLLAALVRALAGAP-----ANILDATCDAILASPaicHPEVLIALAGRSWMSLENSGRA-QRFLIRLAQTQn-Q 300 Vibrio cholerae
1_pfamImport 216 -DNASAADLAAFARGLSGSS----SVPQRQQLLGAILAHPearSIEVLSAIGSRCWLDLSDERL--QIYLEHLAAVG--Q 286
WP_043107596 221 aPFTSPVLFAALLRGLSRGA-----REPLRTAIREVLARPqssDPEVLAAIGGRAWEALDDPDTA-RAWLERLADEAvpT 294 endosymbiont of...
WP_013661633 228 -LEERPEVLAGYVRALSSGDlsapLNLALFKAIGD-ISSCddtHIHLLTALSAKCPHWLSKEPALlRVIMEKLAHREdgW 305 Marinomonas med...
WP_007643882 223 qDIKDEKRLHSVLRGLCQSQ----AKTHVSSFISSLLDSAhgrTSAVLMLIAARHWQYLKESTTL-TIYVELLAVCE--D 295 Paraglaciecola ...
WP_014703447 308 PGFSQLLADVLYLPNLRDPIMQALRSPGRSDALATSVGIMF 348 Methylophaga frappieri
Q5QXS6       297 SLFDALFQDIIALPDIRPLLLSIIAQQKQSAAVNEALNRLK 337 Idiomarina loihiensis
WP_011705084 299 QFFNQVFAELVTLPALRNDMLARLRDPERSDALGQAIGRLF 339 Aeromonas hydrophila
WP_014291877 299 ELFNGLFAELVSVPALRPLILANLHNPELSTPLKQALGGLF 339 Oceanimonas sp. GK1
Q87MD2       301 TLFNQLFADLVMLPELRMVLLPLLHS-SPSEELATALIKLQ 340 Vibrio parahaemolyticus
Q9KTL6       301 PLFNQLFADVVMLPALRGVMLPLLHA-SPSPELAQALEQLQ 340 Vibrio cholerae
1_pfamImport 287 DSFITLIADLMTLPSMRERILAAFRNPERSDTLSAAIGKLM 327
WP_043107596 295 GVFAHCVGDLLRLPGMREPLLGVLRSPDASERLKKAFEALg 335 endosymbiont of unidentified scaly snail isolate Monju
WP_013661633 306 LGFKQIVGELTQHPETNSPLWVLLRSEHISSTLKKAVESLF 346 Marinomonas mediterranea
WP_007643882 296 DTFIGLYSDLAQIPEIREAMLGVLRWPEKSPQLTQAIAQLF 336 Paraglaciecola psychrophila
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