Conserved Protein Domain Family
DUF3540

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pfam12059: DUF3540 
Protein of unknown function (DUF3540)
This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 212 to 238 amino acids in length. This protein has a conserved SCL sequence motif.
Statistics
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PSSM-Id: 492336
Aligned: 13 rows
Threshold Bit Score: 194.82
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_025373593  18 GQVLSIDNGICTVHCDGANWHCTRALSCLVEPQIGDEVLISGPDr-D------------RVFLLAIIARPENTTVTLSVT 84  Advenella mimig...
WP_012238291  17 AIVVGVSGRSLRVRSSSGEVEARRAASCLLEPALGDEVLVAHHE--R------------GSHVLAVLERDDAAPARLSAE 82  Sorangium cellu...
WP_012237563  45 tgVVRGTASGLVVELGGGPVAARRAKSCLVAPDAGDRVLCAVDG--E------------QVFVLAVLEGEAGATTRIVAE 110 Sorangium cellu...
WP_012241081  16 tGSVERVGATLLVRLASSSCEARRAKSCLVAPEAGDKVLCAIEP--E------------GVYVLAVLDGRDGAPTKLATD 81  Sorangium cellu...
CAN96956      19 GAVLRVDGPAYIVETESGEVRAKRATSCLLEPAAGDLVLLTAVN--G------------AHYILAVLEREEGAPSHLVSE 84 
WP_014403203  22 WVEARLDGGLIRVVADGQAMVCRKAVSCLLEPGPGDRVALHAADa-G------------IVYVVAVLERPSSEPACVCFD 88  Frateuria aurantia
Q63NW4        22 SVVGALPDGVYVVECGGAKLRCRRAFSCLVEPRIGDRVVVCGADs-R------------CVYVIAILARPNADGVQLRVE 88  Burkholderia ps...
WP_015404917  18 GVVVEIERECFWVAVGDSRYRAQKAAGCLLYPEVEDKVLVVSSSa-G------------ECYILSVLERTKSTRNRLLFD 84  Desulfocapsa su...
WP_014260292  18 GRVEACAGRLAKVRMGLGLITAERAVGCLLDPHVGDEVLLSVDGa-G------------SAFILSILRRPEGTEAIVSFD 84  Desulfocurvibac...
Q63K59        42 ARVTGRVGDWLLLDDHAGR--ARRADGCLLAPDIGDSVLIWTSApaGaladdddaahapSAYVLAVLARAGAPQAALALP 119 Burkholderia ps...
WP_011768460  19 ATIQGGFANDYMVLSERGVFRANKAYSCLVQPIPGDKVLIANIA--D------------EHYILAIIERPETNNMTLSFP 84  Psychromonas in...
WP_011768465  19 GHVKKEVKDVFIVQSESGVFPAKHAASCLLQPEVDDKVLLSMTD--G------------ELYILAILEK-SSQKSKLKFK 83  Psychromonas in...
CBL44809      20 AKVLGGDSAHFMLQGSQGVFAARCAVSCLVVPVAGDQVLVSSSDn--------------VHYILAVLTHDASAAAELRLP 85 
WP_025373593  85 GDMAIRSEAGAVSVHSAKLTHIHSDQAVKLTAPSHEQENDSAIMKIGQMNYLGKKLDAVVGSTDFFSNVIGLMSDSFKSV 164 Advenella mimig...
WP_012238291  83 GDLEIAAASGRVSVSGRDGVDVITPAEATIAAGSARLSAARAEAVVGVLSLLGDSLTAKVDRIKTVAQSVETVAERLVQR 162 Sorangium cellu...
WP_012237563 111 GDMKVQA-TGRLGLGAGDQIEIAAAREVGLFAGKLQVRAQAAAAAIEEIGLVGRSLEAHLQKAVVVAERMEARADRLVQR 189 Sorangium cellu...
WP_012241081  82 GDLEVQARGGRIAVCASERVDIVGAREVAMTGAEVHVRAKKGAIAIDELGFFGRLVQAEVTKIALVAQEADTILTRLTQR 161 Sorangium cellu...
CAN96956      85 GDLQIRLRRGSLGIAAPDGVHLAAGKDLSMAASTFRVQAKEGHVALELFTFLSKMARGEVDRAKLIGRSLDSALERLSQR 164
WP_014403203  89 RPLQLEV-RGNFELQVQDSASLQCGRAFAVQAEKALLSIELLELVVTSLQGLIGELGLRTGALRLVSKAIDTVAERLVQV 167 Frateuria aurantia
Q63NW4        89 GDLVLEATR-RVCVTSGDALRLASREQLSIEAQRLTMSARQAALTSEKTTLTSAAFDGRLGKIRLIGRLLETVMEHVAQS 167 Burkholderia ps...
WP_015404917  85 GDTELLSPNGNLQLAGKQGVNVTSPSQIRIVSTNLQVVAEQSECSISHLSYIGNFLEGKVALVKLMAGKMESIFDCLRQK 164 Desulfocapsa su...
WP_014260292  85 GPASFRVAQGNLT--------LAAQGEIGLAAGRVAVDAEKAVVRLGLVSLVAERLESQVKRIKSVSKSVDAVCRRLTQR 156 Desulfocurvibac...
Q63K59       120 GGVVLETGADGLRIDAP-HIALAARERIDARAPRVDVSAHRAHVRAAHLDACARSIDGRAHDVRLVARRFTSTIGRALHT 198 Burkholderia ps...
WP_011768460  85 GDVAFEATSGALKLTSGKQMSLTSAEKIQSTSTEIGINTANMKVQANECSVVGDKAVSQWREVNSFSSAMNLVTDRLTQR 164 Psychromonas in...
WP_011768465  84 GDVCLESDAG-LSLSSAKALQLTSLQSVSQIAPEINTLSKKHTLTTEQLSAHSQKMTVKSEQVQAHVKELHGMFERVYQK 162 Psychromonas in...
CBL44809      86 PKTQIKCSE-HLEIQGT---------QIGIQSADLNLTSVRSHWISGALKLYANRLDAQHEEVNFRAGTVQSLMQRVVQR 155
WP_025373593 165 ARLCFRHVKEVDHVRAQTIDYEAEKLTRVHGGYTTLTAQEVMKINGDQIHMS 216 Advenella mimigardefordensis
WP_012238291 163 LDRAYRFIARSETVRAEYLELEARAAFHVKAETTLVNSGGLTKIDGSQIHLG 214 Sorangium cellulosum
WP_012237563 190 AKQAFRFVEALEQVRAGVFDLRAEGLAAVRGENTIVAARTLAKLDGEQVKIG 241 Sorangium cellulosum
WP_012241081 162 AKRVFRFVEEIDQTRAGTIDLRAQNMIGIRGENAIISARVLAKVDGEQIHLG 213 Sorangium cellulosum
CAN96956     165 VKRSYRIVEEADHVRAERIDYAAKGNLAIHSENAKITACHVVKIDADQIQVG 216
WP_014403203 168 LGDSYRSVDGMDQVRAERIDYAALEQLRLHARNALYTADQLAKIDAGQIHLG 219 Frateuria aurantia
Q63NW4       168 CRSSFRTVETVEHLRASHIDHAAAESMRMHAKHTLLTAETLTKIDAAQIHLG 219 Burkholderia pseudomallei
WP_015404917 165 VKRSYREVEDIDQLKAGKIDYNAERLMSLRGKYSVVTAKENIKIDGKMIHMG 216 Desulfocapsa sulfexigens
WP_014260292 157 LGNSFRYVEEHDETQAQTQRVLVEDLLTMHSKNAMIVSEEHVTVNAEQIHLG 208 Desulfocurvibacter africanus
Q63K59       199 LGDCLRRVCGVDELHAARTRWRVDERAHLHARDVTLLADRHVGIDGERIDLG 250 Burkholderia pseudomallei
WP_011768460 165 IKNSFKTVEGLDQQTSLNFLQTIGKTLSIRSRDAVITARKDVKIDGERIHMG 216 Psychromonas ingrahamii
WP_011768465 163 ADQVIRWVETIETLNIGNWVQNIKGTLNSRAKNQVITAKGDIKVDAERIHMG 214 Psychromonas ingrahamii
CBL44809     156 ADTVMRWVEGVETANIGQCIKTVREAWTLHAKHAVLTARSDVRIDGERIHMG 207
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