4IPU,7QYI,2KNQ


Conserved Protein Domain Family
GspH

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pfam12019: GspH (This model is not part of the current CDD release)
Type II transport protein GspH
GspH is involved in bacterial type II export systems. Like all pilins, GspH has an N terminus alpha helix. This helix is followed by nine beta strands forming two beta sheets, one of five antiparallel strands and one of four antiparallel strands. GspH is a minor pseudopilin; it is expressed much less than other pseudopilins in the type II secretion pilus (major pilins). The function and localisation of minor pseudo-pilins are still to be fully unraveled. It has been suggested that some minor pseudopilins may assemble either into the base or the tip of pili, or both. They function as initiators or regulators of pilus biogenesis and dynamics, and/or as adaptors between various pseudopilin component and other members of the T2SS.
Statistics
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PSSM-Id: 520027
Aligned: 242 rows
Threshold Bit Score: 29.0682
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4IPU_A        14 AAEELNAXLQYARSEAVSQRR-AIS--IQ-ALkdkD---WGKG-LSIGvlas--gsiAA-----------PLRKHDGFRA 72  Pseudomonas aer...
WP_014147735  44 AVESLSSDIKLARTEAIKRSA-DVT--LS-VD---N-----TE-WCYGigt----ggTCdc--------tAAVGDADFCN 98  Methylotuvimicr...
WP_014147736  49 ALESLKGDLKLARTEALKRHQ-PIV--VS-RT---Tgn--qGA-WCYGlairtpakaNCdceqpdisandFCDIKRILGN 118 Methylotuvimicr...
WP_005370812  44 AAEAMLADLRWARAEAIVRNQ-KIR--VT-FT---T-----GGaWSYAir------vGPggs------ntLLKTVNGSDF 99  Methylomicrobium
CCE22750      48 AVEAIATDLRLARAESIKRNR-IVK--VT-FS---AgsnWS---YTVHa--------DPdgs------neLLKTVNGSDF 103
WP_014291449  43 AGMAVYADLQLARSEAIKRNR-EVT--VC-FT---Nsg--tAD-WSYAlhd----saDCsg--------dIIETVSSQSY 100 Oceanimonas sp....
WP_015436821  45 AGEALHSDLVYARTEAVTRNQ-TIT--VSfST---G-----TD-WCYGistg--gtcNCat--------aGSCSIKAVSG 102 Azoarcus sp. KH32C
Q5P0Y7        45 AAEALHADLMYARSEAVLRSQ-DIT--VSiTG---G-----AD-WCYGlnag--gtcNCat--------aGSCSIKSVAG 102 Aromatoleum aro...
WP_011704654  46 ATQAVYTDMMLLKSEALKRNR-NLQmiLFnSG---T-----GN-WCYRisid--gscAScndtcssiegrKGVDASEFPG 113 Aeromonas
WP_015879560  43 AAQALYSDIQFARSEAIKRNTdDVVvhLF-QT---G-----NN-WCYQvsdn--pdcDDcgdsdcdihgdGILRGVIWSG 110 Tolumonas auensis
4IPU_A        73 ATLTAKEksa-----veHLTFTA-NGt----LVPPTerTFA-IC----QNGKTDGGRVlSISQAG 122 Pseudomonas aeruginosa
WP_014147735  99 IKIVNGAqfqditfngnNVTFEFrRGtp--iAVSSS--TLS---------SANYGAQV-NINSAG 149 Methylotuvimicrobium alcaliphilum
WP_014147736 119 DFEHITMepa----ginNNTFNPrRG-----TVAAG--GVT-FS------TAKYAARV-VFADTG 164 Methylotuvimicrobium alcaliphilum
WP_005370812 100 PATTLASasfa--ggvaYTTFDPiRGi----NPNNG--TAT-IT------SNHFSVGV-KVSTLG 148 Methylomicrobium
CCE22750     104 FGTTLDSaafgg-dddvFTLFNPtRGd----NLMDG--ATT-LT----SEYFSA--TV-TVSLLG 153
WP_014291449 101 PSMMLTAsys-----pgRLTFGPrRS-----SLSSG--NVQ-LS------NGHHMMKL-VTSNTG 145 Oceanimonas sp. GK1
WP_015436821 103 TSYTGTTlat----sftALTFDGvQGtiggaGGTVG--TDTvLIqnsiGQAGVRPAMV-SLKLCS 160 Azoarcus sp. KH32C
Q5P0Y7       103 STFNGTAlts----nftSLTFDGtQGt---iSGAGG--TIGtDTvligNALGQAGVKL-LPVSVK 157 Aromatoleum aromaticum EbN1
WP_011704654 114 IILTGTYtess--sqirPISFSPrRG-----TLPSG--SIT-VS------SSAASMKV-VTNNLG 161 Aeromonas
WP_015879560 111 YPNVSMAsn------tsSVTIQSqRA-----VMNSN--RII-FS----YGQTGKEIEV-RTTPLG 156 Tolumonas auensis
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