Conserved Protein Domain Family
DUF3500

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pfam12006: DUF3500 (This model is not part of the current CDD release)
Protein of unknown function (DUF3500)
This family of proteins is functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 335 to 438 amino acids in length. This protein has a conserved GHH sequence motif. This protein has two completely conserved G residues that may be functionally important.
Statistics
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PSSM-Id: 520018
Aligned: 75 rows
Threshold Bit Score: 247.49
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012948623  14 RDVASRMAEAAGAWLDGLDAEQRRIAVGaapgddpSDAERRRWFYTP---TdHGGLTFHAQQPAQQRAAMRLVATGLSTP 90  Geodermatophilu...
WP_014020529  49 NSEIEAMREAMVSFRSSLSASLLSEASNc-----lDDERFYLWHNTPandgnRDGITYGDLSDAQLIAFKNILQQFLSSG 123 Cyclobacterium ...
WP_014444855  53 TGGTEDVLNATTAFLALLDDTQKTSVQGe-----rTTDNLTKWSNLPdqlftRAGLRMDALSTEQQAAVLKILQAALSSD 127 Actinoplanes mi...
ABS04166     109 AQTISGTAAAAEAFLATLSEEQREAVLYay----dDETKTTSWSNFPvtfveRAGLNLTDLTDEQRTAALAVLEALLSDE 184
Q8NLN5        80 AETISNTAEAAQAFLSTLSTEEQDAVLYdy----dAEEKSTGWSNFPvtfvqRSGVNLTDLTEEQQAAALNVLKNLLNDD 155 Corynebacterium...
Q82FU2        55 GANTAQVVAAANAFLATLSDEQKDTVLYdf----dDAAKKTGWSNFPtpvvaRNGLKFGDLTDEQEAAALKVMEAALSKK 130 Streptomyces av...
WP_014369167 113 AETDAAVACLADAFLKTLTDEQKEAVQFd-----lTAENGAVWSNLPagnvkRNGLMFGTLSTESLEAVKALAAEALSGT 187 Paenibacillus m...
WP_014445445  42 dKSVAGVVEAAEAFLATLDDDQKTEAQLe-----lTEENAVSWSNLPcgstcRPGISFGDLDASQLAAAKSVLKTALGAQ 116 Actinoplanes mi...
WP_008198103  20 AQTADKLILTTQDFLNTLDSEQKSKVMLt-----mEDSMRSKWTNLPlglApRAGLRYGDFSEESKIQFHKILSAIFSSQ 94  Algoriphagus ma...
WP_015333173  20 sQSVTVITEATSRFLGTLSADERQRTQYa-----fTDSLRFKWTNLPvglVpRPGIAYGSLSDNSRLAFHRVLSAMLSSQ 94  Fibrella aestua...
WP_012948623  91 ---GYVTVATIIGLEN-VLdqvegfvtr-----------------------------------------------fdrer 119 Geodermatophilu...
WP_014020529 124 ---GYQKVYEITELSEgWLhnvms-------------------------------------------------------s 145 Cyclobacterium ...
WP_014444855 128 ---GYAQVTGITTGDG-VLkasggm-----------------------------------------------------dl 150 Actinoplanes mi...
ABS04166     185 ---AYQTVTGIVGGDE-YLaensss------------------------------------------------------t 206
Q8NLN5       156 ---AYQMIEDIMASDQ-YLndesnt------------------------------------------------------t 177 Corynebacterium...
Q82FU2       131 ---GYEELVEIRKADD-YLatlpprtptpptstptatptgtp--------------------tatptggggrppggggga 186 Streptomyces av...
WP_014369167 188 ---GYSTLRSIILADE-YLttdtgn------------------------------------------------------t 209 Paenibacillus m...
WP_014445445 117 tgsGYERVEQLLLADD-YLadaqgsssgssagssggpgggmmsggppagmsggpggmmsggpdgggmmsggpgggtggtg 195 Actinoplanes mi...
WP_008198103  95 ---GYLKTFSIMQVDD-ILheifeikfqngein-------------------------------------eetinmirgl 133 Algoriphagus ma...
WP_015333173  95 ---GYLKTTSLMQLDD-ILntlyqqafdsgkid-------------------------------------qrmltmmqnm 133 Fibrella aestua...
WP_012948623 120 grdpGLYYLRVFGEPgGSGVWGWRFGGHHVSLNNLVVd-GALVSATPCFLGADPATsPLLGGAV--NRPLARVEDLARDL 196 Geodermatophilu...
WP_014020529 146 vwdpDFYSIDMFGDPeTSGSWGFQLDGHHCVVNFLVH--GDNVSIVPAFLGGEPAA---DTWNGerFDIFSDERDLALSL 220 Cyclobacterium ...
WP_014444855 151 dfgaDHYWIRILGTPsESEIWTIQYGGHHLAVNITLK--GDAMTLAPTLWGAQPAS---YTTSGttVEPLKGETDEAFAV 225 Actinoplanes mi...
ABS04166     207 edslGQYYIAFFGDPsDTDAFEVQFGGHHLGINATLDgaSDAITFAPTHLGVQPAVy--TDEDGdeVQPFDGIYTDAFAF 284
Q8NLN5       178 edslGQYYIAFFGDPsSDSDWSIQFGGHHIGINTTFS--DGAITFAPTHLGTQPSEw--TNEDGetVAALSNMYETAFAF 253 Corynebacterium...
Q82FU2       187 nfgsEWYYISFFGLPsRTGEFTVQYGGHHAAYNLTYA--GDNVSISPTLTAVEPME---FNWEDlyYAPLEDKRTSTIGA 261 Streptomyces av...
WP_014369167 210 mwdaDLYYIAFLGTPsATEPWVLQISGHHYAANLSFN--MKTDSATPMFVGVEPQT---FTMDGvtYEPLAARRDAMYTM 284 Paenibacillus m...
WP_014445445 196 gygsGLYYLAFLGTPsTTGTWELNFGGHHLAVHMSYKs-GEVVGASPYFVGVEPTSw--TDDSNatHTPLGDMKDAMLAM 272 Actinoplanes mi...
WP_008198103 134 nwdyGNYFAAVWGEPkEEGTWGLKFEGHHVSINLTMVn-SEY-SLTPLFFGSDPAVvETTQYAG--IRPLSKEEDYGFWF 209 Algoriphagus ma...
WP_015333173 134 kwshGNYFISIWGKPqPGEAWGLNFGGHHLALSLTSTg-QAI-SMSPYFIGTDPSEvKSGKYAG--LRVLSKEEDYGFLL 209 Fibrella aestua...
WP_012948623 197 VRSLPPELAARAVLLPKAPSDLVTANRTVVtpgdrvvplagiwrderfldageqaklqalsdaideaagyedadhaavey 276 Geodermatophilu...
WP_014020529 221 YNSLDESELTVASSISTSRSLEVGPADRNGdpdpyi---------------------------------------gaydy 261 Cyclobacterium ...
WP_014444855 226 MDALDGEQQKAAQLDTAITEIVLGAQQDGKt------------------------------------------------- 256 Actinoplanes mi...
ABS04166     285 FDSLTVEQQATLTSGDVSS---CAPGDTCDf------------------------------------------------- 312
Q8NLN5       254 YDSLAEEQQAQLYQGEELDSMVCAPGSTCDy------------------------------------------------- 284 Corynebacterium...
Q82FU2       262 IQSLTADELTAAEIDGSFDDLYLGPGHDGPf------------------------------------------------- 292 Streptomyces av...
WP_014369167 285 LGSLSAEQQKTATISGKFDDVLVGPGQDGNf------------------------------------------------- 315 Paenibacillus m...
WP_014445445 273 LDGLSDAEQSEAKLSQSFSDVLVGPQEDGQf------------------------------------------------- 303 Actinoplanes mi...
WP_008198103 210 VNLLDEDQKAKAVFEDKVPGDIITSPDRPQw------------------------------------------------- 240 Algoriphagus ma...
WP_015333173 210 INALTDAQKAVAILKQDVPKDIITSPQGSQr------------------------------------------------- 240 Fibrella aestua...
WP_012948623 277 TAEPRGVPASELDAEQRGMLRALLGTYLERVPPEVSpvrryDDEAA-------LDAVHVAWAGPTTP----GAPHYYRVQ 345 Geodermatophilu...
WP_014020529 262 SGFETGLKYSDMSATAQANLLLVMKEYVYNLSDNFA-----DEWWQdim--dnIDDTYFVWINDSGSsptaSSEFYYRIY 334 Cyclobacterium ...
WP_014444855 257 -LAEEGVKVSTFSEKQKELLMALITEWLSTLTPAQA-----QSKIEeae--nnLDKTWFAWSGETTE----GRPIYYRVQ 324 Actinoplanes mi...
ABS04166     313 -AVGTGLTGADLSEEQRQLLLELIANWAGMADEQST-----ATTFAeie--atLDDTVVAWSGETTYdmssGDGISFSIS 384
Q8NLN5       285 -PTGTGLKGSDLTDEQKELLIDVIANWVGLADEETT-----ETELDair--etLDDTYINWSGATEYdtstGDGIYFQIS 356 Corynebacterium...
Q82FU2       293 PQQPEGVLVSSLTKKQRAEVTAMLKAWVDDLDEKAA-----KRLIAkyv--seYDKTYIGWSGGTTLd---NNQTYVRLD 362 Streptomyces av...
WP_014369167 316 PAKEEGILYTELDDSQKALVKASIEAWVKDANEELS-----QELLSaylseeaLSQTYIGWSGSTSYa---DHGSYIRIS 387 Paenibacillus m...
WP_014445445 304 PATKQGLAVSSLTDDQKDLVLAAIKPWVAGADDATA-----TSLLAtye--geLDKTYVGWSGTTGLd---THADYVRID 373 Actinoplanes mi...
WP_008198103 241 ISEYRGIKGSELNPEQQKVLHYLIEEYIENLEVQKA-----DEFMAilh-ergLDQVYFSWIGSLEP----MKAHYYLIH 310 Algoriphagus ma...
WP_015333173 241 ITSYYGIAASRFTADQQAILTLLIQEYTHNFEHQKA-----HQLYDkim-ksgLEKVYFAWVGSLEN----NKPHYYIIN 310 Fibrella aestua...
WP_012948623 346 GPRLLVEWDNTqr------------gANHAHSVWRDPGSDFGL 376 Geodermatophilus obscurus
WP_014020529 335 NPYLWAEFNTEgstgan---sgsiadYNHVHTITRIPNnpttd 374 Cyclobacterium marinum
WP_014444855 325 GPSLIIEFAHQqgega------naggITHIHSIYREPDNDYGA 361 Actinoplanes missouriensis
ABS04166     385 GANVYVSFQAQdgsagadvdgvttsgWGHVHTVYRDPTNDYAG 427
Q8NLN5       357 GPKVYIEFANQqgsagadidgvitagWGHIHTIYRDPTNDYAN 399 Corynebacterium glutamicum
Q82FU2       363 GPSAWIEFSNQpga---------stdGIHQHTIFRDETADYGW 396 Streptomyces avermitilis
WP_014369167 388 GPRVWIEFVCQtgva--------ykdQIHFHTIWRDKLADYGG 422 Paenibacillus mucilaginosus
WP_014445445 374 GPSVWVEFVCQngvv--------iqnKIHYHTVYRDHTRDYGG 408 Actinoplanes missouriensis
WP_008198103 311 SPDFIIEYDNVgfl----------dnANHIHSILRKKDGDFGE 343 Algoriphagus machipongonensis
WP_015333173 311 GPDFLIEYDNVgfq----------ndGNHIHAILREKGNDFGD 343 Fibrella aestuarina
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