3K8P


Conserved Protein Domain Family
Dsl1_C

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pfam11989: Dsl1_C (This model is not part of the current CDD release)
Retrograde transport protein Dsl1 C terminal
Dsl1 is a peripheral membrane protein required for transport between the Golgi and the endoplasmic reticulum. It is localized to the ER membrane, and in vitro it specifically binds to coatomer, the major component of the protein coat of COPI vesicles. Binding sites for coatomer are found on a disorganized region between the C and N termini of Dsl1. The C terminal domain is involved in binding to the Sec39 subunit of the Dsl1p complex. The N terminal complexes with another subunit of the Dsl1p complex called Tip20 which forms heterodimers by pairing the N termini of each protein.
Statistics
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PSSM-Id: 492279
Aligned: 5 rows
Threshold Bit Score: 289.333
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3K8P_C       167 LLQLXELNSRRLDLNLNLIKKTIYKLVNDQLQELKDNERTPDWDITISSLLPYLKKTALPTLYKL---EDNTILVALIRY 243 Kluyveromyces l...
Q6FNZ0       551 MKRLQELIYNYMETNLQNTKKISKRILSSQLQQFQRNENNPSWNDTLDNFLPFLEEELANITTHItqeDSFRYITRLFSF 630 [Candida] glabrata
XP_001646940 553 LDRLNELNYRLMENQIALKEKYVNSIIQNSLGNLERDEKDIRWRSQIKDLVPFIQCDIINPLISIgnpDSEKFILKFLNF 632
Q752C3       572 LYQLSELTARFTENNIATMRKAVFNMLQEQLNNLKANELSPNWDVTRNSLLPFIHDEVQPAFERL---SDQSVLLNFLKF 648 Eremothecium go...
P53847       560 LYRIKELTRNLLETKLNMKYRIVCQLIRHQLTEFRENERNPSWDATIEKLLPYILKEIVRPLQKIrgeEGSRYLLSFLNF 639 Saccharomyces c...
3K8P_C       244 IVHDLVIDNILHWRVISEKSSENLSEFIXLLLSGLEIPRLNLIETYRHSREKLGILSKILTAHLKDILEXFYEGEFFLFE 323 Kluyveromyces l...
Q6FNZ0       631 IFEDVIIQNILSWDIISEKNSENISELLKLIITSTQIDSLNTYPKYRELYERVNIVAKLLPLHLKEIMEMFYNGDFYLFA 710 [Candida] glabrata
XP_001646940 633 LFNNCITSNILNWKIISEKNSNNLSEFISLVLNASEVPSIETSPKYREIREKFIIIGKLLPLHLKDIMQMFYDGDFYLFS 712
Q752C3       649 LYNDCLVNEILQWNIISEKNSENLSELIHMIYNGTKFSALQDNNDYKHARTKLAIIALILKAHLKDIMDMFYNGDFFLFS 728 Eremothecium go...
P53847       640 LYNDCVTKEILKWQIISEVNSENLGELVSLLVNNTDIQLLAKEPSYKKMREKFATMGKFLPLHLKEIMEMFYNGDFYLFA 719 Saccharomyces c...
3K8P_C       324 TDEIVQWIILLFADTPTRRDCIDEIRRVREEATD 357 Kluyveromyces lactis
Q6FNZ0       711 TEEIITWIKLLFAETPLRKDAIDDIYEIRNTPTE 744 [Candida] glabrata
XP_001646940 713 TEEIVQWIVLLFADTPLRRNAIDDINEIRKETLD 746
Q752C3       729 TEEIIQWILLLFADTHMRRDCIYEVRTIRQESEE 762 Eremothecium gossypii
P53847       720 TDELIQWIELLFADTPLRRNAIDDIYEIRGTALD 753 Saccharomyces cerevisiae S288C
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