5C3M,1U8X,3FEF


Conserved Protein Domain Family
Glyco_hydro_4C

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pfam11975: Glyco_hydro_4C (This model is not part of the current CDD release)
Family 4 glycosyl hydrolase C-terminal domain
Statistics
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PSSM-Id: 519998
Aligned: 243 rows
Threshold Bit Score: 99.4593
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5C3M_A        197 FAGLNHMVFGLHVYl--DGVEVTEKVidlvahpdrsgvtmknivDlgw-------------epdFLKglkvlpcpyhryy 261 Geobacillus st...
WP_013306978  195 ACGINHFTWFQEIIqksTGEDLYPKLkeieqkg----dwlanwhElal-------------------------------- 238 Maribacter sp....
XP_002485941  196 AGGFNHFSVLVEAKykdTGKDAYPDIrekapayfeka-----------------pavfgyigerRLF------------- 245
WP_012582573  193 VAGFNHSIFLTKFKy--KGENAYPLIdkwi----------eeeaPklwnsyeymispweytqlsPAS------------- 247 Dictyoglomus
WP_012186261  205 AVGLNHVVFLTRFKy--NGEDAYHLIdewi----------ekkaEefwasyvp---gpweetlsRAA------------- 256 Caldivirga maq...
jgi:Igag_0370 229 MKGLNHDIWLTRFRy--KGEDTYKYIdewi----------kedaEkywsvwreyttnpwnldlcPAA------------- 283
jgi:Tpen_1511 201 AIGFNHVIWLTKFTy--DGEDAYPLIdrwv----------eekaEqywsqwrmrqvnpfdiqmsPAA------------- 255
WP_012185884  201 VIGVNHDDWLTRLKy--NGEDAYHLIdewi----------stksSqyfekwreeqsnpfdvhvsPVA------------- 255 Caldivirga maq...
WP_013130052  202 MSGFNHVIWLTRFKy--DGLDGYELIdkwi----------keeaEkywrkwwattsnpfdiqlsPAA------------- 256 Thermosphaera ...
WP_011839000  201 IIGFNHVIWLTKFKv--DGEDGYKFLdkwi----------vteaDkywkkwrettanpfdidlsPAA------------- 255 Staphylothermu...
5C3M_A        262 yqtdkmlaeeleaaktkgtraevvqqlekelFELYKDPNLaIKP--------PQLEqrggaYYsd--------------- 318 Geobacillus st...
WP_013306978  239 ------------------------------grILFRRFGQ-WPS--------PASN-----HYgeylrwagefvipqlqf 274 Maribacter sp....
XP_002485941  246 -------------------------------QHILKKFDH-LPI--------TTDS-----HFgeyipwaasavdhrgim 280
WP_012582573  248 -------------------------------VEMYRLYGL-FPIgdtpravsPWWF-----HTdlnekkkwypaggpdse 290 Dictyoglomus
WP_012186261  257 -------------------------------VDMYRLYGL-YPLgdta-rsgTWKY-----HRdlktkiywygpiggvds 298 Caldivirga maq...
jgi:Igag_0370 284 -------------------------------IDMYRTYGL-LPIgdtv-rggTWKY-----HWdlktkqywygqygepds 325
jgi:Tpen_1511 256 -------------------------------VDMYRRYGL-FPVgdtv-rggTWKY-----HSslktkqywygptggpds 297
WP_012185884  256 -------------------------------VDMYRMYGL-WPIgdtv-rsgTWKY-----HWdlktkqywygplggpds 297 Caldivirga maq...
WP_013130052  257 -------------------------------VDMYLKYGM-FPIgdtv-rggTWKY-----HWnletkkkwygpyggpds 298 Thermosphaera ...
WP_011839000  256 -------------------------------IDMYKNYGL-LPIgdtv-rggTWKY-----HWnletkkkwygpyggpds 297 Staphylothermu...
5C3M_A        319 --------------------------------------------------------------aACSLISSIYNDKR-DIQ 335 Geobacillus st...
WP_013306978  275 fydpydghpwennqipegvytvdrvdyerewskdwskkllpvgsteeiqlenedgsfkssgeiATLIMESVVTDKKeWLE 354 Maribacter sp....
XP_002485941  281 efynsyks-------------------------------dttgnlaeaerrvaegtpaseywrVVPIIEGIVNNTGhFEM 329
WP_012582573  291 igwtmylyglkl-----------------------rlaqmerlardpnvsivkelpveesmesIIPFVDAIVNNHR-RRL 346 Dictyoglomus
WP_012186261  299 evgwgirmlrnq----------------------eaeaklenaafnpsikateayppvksgeqIIDFIDSVVNNVE-RRM 355 Caldivirga maq...
jgi:Igag_0370 326 eigcairiqivr----------------------rnieemaniafnmstpvsqrislkpsgevIVSLIDSIYNDKHtESY 383
jgi:Tpen_1511 298 eigwalytahqe----------------------ywlatlaqaasdpripvsslfpqtrteesVVPLIESLMLDKP-GEY 354
WP_012185884  298 eigwamyltwhki---------------------efnelkraleneakpltdyippvrsegepVTMVIEAIVEDSG-KVI 355 Caldivirga maq...
WP_013130052  299 evgwalyttyla----------------------yqmemikgfvqaesapltmlippkpsgeqVIDITESIAADVL-RKY 355 Thermosphaera ...
WP_011839000  298 eigwamyvaflk----------------------mrlyeiykaitdtsrpltllfppkpsgeqVIELIDSMVTGTP-RTF 354 Staphylothermu...
5C3M_A        336 PVNTR--------------NNG-AIASIPPESAVEVNCVITKDGPKPIAVGD-L-P---VAVRGLVQQIKSFERVAAEAA 395 Geobacillus st...
WP_013306978  355 AVNVP--------------NKG-AIPNLPDDLVVEVPAYGDTSGIHPVQMKP-I-P---EGIAATIRLHASIHQLLVEAY 414 Maribacter sp....
XP_002485941  330 AVNIA--------------NDG-FIESLPRNQMVEVPATIDKDGIHGYKFKS-Y-P---KAFAGLLRLQMPVNEMTTEAV 389
WP_012582573  347 VLNVP--------------NQG-AIPGIPDDVIVEIPVYVDKNGIERERIEK-IpS---RLMLYVLIPRWLRMERILQAF 407 Dictyoglomus
WP_012186261  356 ILNIP--------------NNG-VLPRLPSDAIVEAPVYVKGEVIRPEAIEN-VpN---KMYSYVWYPRIAVTERALEAY 416 Caldivirga maq...
jgi:Igag_0370 384 EINVPrigsvkapiyvnvlNNG-SVPGIPDNVAVETHVRVDGKGIHPIQTSG-LpS---KVFKYAILPRIMRLEWALEAN 458
jgi:Tpen_1511 355 QVNVL--------------N-GnAIEGIPSNVAVEVPARVDARGIHPKT-GLrLpR---KILSLVMQPRLLRAEMAIAAF 415
WP_012185884  356 EVNVP--------------NQD-AIPGIPSDVAVEMPARVDAKGVHRLSFSN-LpKawgKVLKYAIMPRVIRGEWAIEAF 419 Caldivirga maq...
WP_013130052  356 QVNIL--------------NNG-LIPGIPDNVAVEVPAVIDGQGVRRISVTP-PnN---RVLKHVLLPRMMRMEWALHAF 416 Thermosphaera ...
WP_011839000  355 QVNIL--------------NNG-SIPGIPDNVAVEMPAVIDDKGVHRKTFPP-LpS---KIQKYVIYPRMMRMEWALEAF 415 Staphylothermu...
5C3M_A        396 VTGDYQTALVAMTINPLV 413 Geobacillus stearothermophilus
WP_013306978  415 NEQSKDKLLQAILIEPTV 432 Maribacter sp. HTCC2170
XP_002485941  390 LSKSKKAALQALLLDPVV 407
WP_012582573  408 QEGDRTSLLLMVMDDPRT 425 Dictyoglomus
WP_012186261  417 LAGSKELLIEALMFDPRT 434 Caldivirga maquilingensis
jgi:Igag_0370 459 LKGGRDTLVEWLIVDVRT 476
jgi:Tpen_1511 416 LEGGRQFLIDWLMLDPRT 433
WP_012185884  420 LGGGRDTLFNWLIIDPRT 437 Caldivirga maquilingensis
WP_013130052  417 LEPSKDALLEWLMYDVRT 434 Thermosphaera aggregans
WP_011839000  416 LEGGRDKLFEWLIYDPRT 433 Staphylothermus marinus
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