Conserved Protein Domain Family
DUF3479

?
pfam11965: DUF3479 
Domain of unknown function (DUF3479)
This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. This domain is about 160 amino acids in length. This domain is found associated with pfam02514.
Statistics
?
PSSM-Id: 403247
View PSSM: pfam11965
Aligned: 70 rows
Threshold Bit Score: 163.859
Threshold Setting Gi: 501215432
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012282388       7 RFVHVY-LERQICSAFSRAIEMSNRTQPiEISVTSFCVHELKEK-VKIE-------------EFRRAVLNADLLFVGHVF 71   Heliobacte...
EEC50789          87 KIVLVAgFESFNRELYSQAARDL------DVDLTVFADSDIRVPpTTTTttvrdahdlavnpDFASAVRQADAFIGSLIF 160  Phaeodacty...
XP_002290653      78 NVVLVTgFESFNRDLYEQSAALLPPEL--SVNLSVFSDSDIRTSk-----------------RFASAVQTADIFIGSLIF 138  Thalassios...
jgi:Caur_3371      6 EFVMVLgLQRYSQDFFRRAEAEVRKEVP-DFRLHIFEDRDVTARpA----------------EVEAAIARCQCLILSLIT 68   Chloroflex...
jgi:RoseRS_2525    3 tLTFILgMERFNAHIWEEVEQNLRQSGV-EVRLLRFHDGHVERRdP----------------ALAEAIAQADVLFITLIN 65   Roseiflexu...
jgi:Ctha_1287      6 KIVAILgMDQYNRRVWKDVRQMLGD----AAELTEWSDLDLEQQnE----------------ELATALQSADCLFLTLIQ 65   Chloroherp...
jgi:Ppha_2581      6 RIAAIVgMEQCNQRVWREVTAKIAA----HAELTQWTDQDLEHQnP----------------EAAEAIRNADCIFTTLIQ 65   Pelodictyo...
WP_012500239       6 KIVAVLgMEQYSRRIWTEVKQMLAG----EAIVCQYTDIDLENKnP----------------KLAEDISSADCIFASMIN 65   Chloroherp...
Q3ARX9             6 KIVAIVgLEQYNAALWQKVKELLAG----DAALSQFSDVDLERQnP----------------EAAAAIVGADCIFVSMIN 65   Chlorobium...
jgi:Paes_1436      6 KIVAIVgLEQYNTNLWKKISKQLEK----EAQLTQWSDVDLEKQnP----------------LAAEAISEADCVFMSMIQ 65   Prosthecoc...
WP_012282388      72 VDDIARTIADVIRKEGQQVPTVVCVNAMPELMKLTRMGGFKMGs---------EQSNEYMNIIKRFKktidteeaqsKKS 142  Heliobacte...
EEC50789         161 DYDDVLAVQSVLPA---VQGPRLVFESATELMTFNTVGSFSMApsaekgggsaGPPPAVKAILSQFG----------SGK 227  Phaeodacty...
XP_002290653     139 DYDDVVAVSKLLDN---VRGPRLVFESATELMTYNRVGKFSMEtagd---epsGPPPAIKAVLNKFS----------SGK 202  Thalassios...
jgi:Caur_3371     69 LNETAEVLVPMVERHDP--PVVFSFEGLPEVMRLNKVGSYNLKag-------kGMPKPVQNIARLLV----------GGR 129  Chloroflex...
jgi:RoseRS_2525   66 MRDQAQWLKEQIDRAGT--PTVFAFESMPEVMALTRVGEYRVqng-----graSMPKPMQAVLRLMT----------RGR 128  Roseiflexu...
jgi:Ctha_1287     66 FKPQADWLKECLEKSSV--ETIFAYESMPEVMAMTKVGDYNPagd------gsGMPDIVKKVAKMLV----------KGR 127  Chloroherp...
jgi:Ppha_2581     66 FKGQADWLQEQIEQSKV--KTIFAYESMPEVMQMTKIGNYVVsgd------gsGMPDIVKKVAKMLV----------KGR 127  Pelodictyo...
WP_012500239      66 FRDQVEWFQEHIEKANV--PVVFIFESMPEAMELTKVGSYVVkgg------ggGMPDMVKKVAKLLV----------KGR 127  Chloroherp...
Q3ARX9            66 FRDQVEWFKAQLARVQK-EQTVFVFESMPEAMALTKVGSYAVsdg------kaGMPDVVKKVAKLLV----------KGR 128  Chlorobium...
jgi:Paes_1436     66 FKDQVQWFREQLENASNKEKTVFIFESMPEAMALTKVGDYVVteg------kgGMPDAVKNIAKMLV----------KGR 129  Prosthecoc...
WP_012282388     143 GPpiNTDVMMTLVRTVPKLLKYIP-GKMQDLRSYM 176  Heliobacterium modesticaldum
EEC50789         228 EEd-KLSAYLKLLKVGPTLLRYVPgEKASDLRTWL 261  Phaeodactylum tricornutum CCAP 1055/1
XP_002290653     203 EEd-KISGYLKMLKFGPDLLKYIPgEKASDLRTWL 236  Thalassiosira pseudonana CCMP1335
jgi:Caur_3371    130 EEd-AFYGYVKLQKITSKLINFLPgKRLNDFRNWt 163  Chloroflexus aurantiacus J-10-fl
jgi:RoseRS_2525  129 EEd-TLYAYTKLTKLTAKLLPLMP-PKLKDFRTWL 161  Roseiflexus sp. RS-1
jgi:Ctha_1287    128 DEd-ALYGYMKLLKIMRTMLPLIP-NKAKDFKHWM 160  Chloroherpeton thalassium ATCC 35110
jgi:Ppha_2581    128 DEd-ALYGYMKLLKIMRTMLPLIP-KKAKDFKNWM 160  Pelodictyon phaeoclathratiforme BU-1
WP_012500239     128 DEd-SLYGYVKLLKLMRTMLPLIP-KKAKDFKNWM 160  Chloroherpeton thalassium
Q3ARX9           129 DEd-AMYGYMKLMKIMRTMLPLVP-DKAKDFKHWL 161  Chlorobium chlorochromatii CaD3
jgi:Paes_1436    130 DEd-ALYGYMKLMKIMRTILPLVP-KKAKDFKNWL 162  Prosthecochloris aestuarii DSM 271
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap