9GBK


Conserved Protein Domain Family
PSME4_C

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pfam11919: PSME4_C (This model is not part of the current CDD release)
Proteasome activator complex subunit 4-like, C-terminal
This domain is found at the C-terminal end of human Proteasome activator complex subunit 4 (PSME4) and similar sequences from eukaryotes. PSME4 is an associated component of the proteasome that specifically recognises acetylated histones and promotes ATP- and ubiquitin -independent degradation of core histones during spermatogenesis and DNA damage response. This protein adopts a dome-like structure composed of HEAT repeat-like modules and a C-terminal domain that contains a hydrophobic -tyrosine-other motif (this entry). This domain, which adopts an all-alpha structure, is responsible for the interaction with the alpha-ring surface of the 20S.
Statistics
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PSSM-Id: 519962
Aligned: 83 rows
Threshold Bit Score: 74.8982
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
9GBK_3       2056 IKIHGNVLGLGAIISAFPYVFPlpPWIPKQLSNLSS----WART-Sg-mTGQAAKNTISEFKKVRADTWkf-drASFNTE 2128 brewer's yeast
XP_001463309 2360 GRRVALVQALGAVVLADPGEPS--SYVPKVMVQLAG----CAREgNt-eCGRVAKRVFEEWWHAHREGWehvykSRFTPA 2432
Q4D240        187 RRRIALLLALCSILCATPGVVP--PYVPRLMERLAA----HAHDpAp-eVQRAVKRTFEEWWRSHREGWelehkPRFVAA 259  Trypanosoma c...
4_pfamImport    1 -----NVLGLSAVVLAAPCDTP--PWVPGALESLAKh--vNDESpGrlpVRQTVTHTFKEFRRTHQDKWeeshkARFSRD 71  
XP_002286500  107 kRQQKSVFVLCAVVMGRPYDTP--PYVPEALAALSKhsfeQRASlG---VREVVKLCCSEFKRTHTDNWea-hrNQFTQT 180 
XP_003284088 1781 IEKHSSILVLCAIVLANPYEFP--TYLPEVLEQLSR----FAYNsNf----kGASTVLSDFWRTHSSTWee-dkLQFTES 1849
2_pfamImport    2 VRVHGAVLGLGALCLAHPFSLP--LEILKPLGVLNT----CRSSrAl--IKNEITMILREFRRQHRDDWek-tkKVLGAK 72  
EFP13219     1796 ASSHGAALALGALVLAYPFSLP--NKILKPLRILSS----TTSKrAi--VHKTMTETVREFRRQHRDDWhk-tkQILGKS 1866
Q1ZXS9        313 ARAHGASLALGAFVLAFPFFLP--TNIIKPLSLLSS----SSSNqAv--VKKTMTETVREFRRQHRDDWee-tkKILGDA 383  Caenorhabditi...
NP_001263461 1789 VIAHGAAFALGAFVLAFPFSLP--SEILKPLRILSS----TSSNkAa--VKQTMTETVREFRRQHRDDWed-tkKVLGDT 1859
9GBK_3       2129 eled--legvL-WRSYY 2142 brewer's yeast
XP_001463309 2433 evda--msdlLlAPRYY 2447
Q4D240        260 niqidamlplLtAPAYL 276  Trypanosoma cruzi
4_pfamImport   72 qldt--fddvLgGAHSY 86  
XP_002286500  181 qlea--ledvVsTPHYY 195 
XP_003284088 1850 qied--iqstKvAPSYF 1864
2_pfamImport   73 lsfdi---enstAPAYY 86  
EFP13219     1867 lvfdi---enatAPAYY 1880
Q1ZXS9        384 ltfdi---enttAPAYY 397  Caenorhabditis elegans
NP_001263461 1860 lvfdi---enatAPAYY 1873
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