7MEL


Conserved Protein Domain Family
GlgE_dom_N_S

?
pfam11896: GlgE_dom_N_S (This model is not part of the current CDD release)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S
This entry represents domain N and S of GlgE. GlgE is a homodimer and a member of the GH13_3 CAZy subfamily. Each subunit of GlgE is composed of five domains, domain A is a (beta/alpha)8 barrel, typical of the catalytic domain of this family of enzymes, that forms part of the dimer interface. Domain B corresponds to an insertion after the third beta-strand of domain A. In GlgE, domain B is fairly typical for a GH13 enzyme in having a pair of anti-parallel strands and one short helix. The C-terminal domain C has a beta-sandwich fold. The N-terminal domain N, which also consists of a beta-sandwich fold, forms the core of the dimer interface. The final domain arises from an insertion within domain N and forms a four-helix bundle where the last helix is discontinuous and slightly kinked. This domain, which will henceforth be referred to as domain S, participates in the dimer interface and interacts directly with domain B of the neighbouring subunit.
Statistics
?
PSSM-Id: 519948
Aligned: 141 rows
Threshold Bit Score: 168.499
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
7MEL_A         19 GRIPVLDVRPVVQRGRRPAKAVTGESFEVSATVFREGHDAVGANVVLR---DPRgRPGPWTPMRe---LapgTDRWGATV 92  Streptomyces c...
8_pfamImport    1 GRIPVHNVQPVLEGGDYAAKAVENGDLPVTANIFREGHDAVAAAVVLTdp----aGATQRFEMAqiepIg--LDIWMAWI 74 
WP_013138739    3 ARLVIDDIAPAVGEEPYPAKAVLGELFPVRAVVWGDGHDALGATVVATap--gS-RNALALHMRpg----sePDTFHALL 75  Segniliparus r...
WP_013224467    3 GRLGIDDVSPSVACGRYPAKAVVGEHIPVFATVWREGHDAVAATVAWRgp--eD-RLTRQTRMVprgpDh--PDEFAAVI 77  Amycolatopsis ...
6_pfamImport    1 GRLGVDDVSPAVSCGRYPAKAVVGEHVPVRATVWREGHDAVAATVVWRgp--eD-RVARQTRMSpegiG---LDRWAAVI 74 
WP_025360696    3 GRLGIDDVTPTVSCGRYPSKAVVGEHVPVHATVWREGHDAVAATVSWKgp--yD-RTARQTRMVpqdgG---LDGFAATL 76  Kutzneria
WP_013673896    3 GRLGIDDVSPAVGDGRHPSKAVVGEVIPVRASVWREGHDAVAANVVWKklg--stDDAVHVRMVpdgvG---NDRFVGTV 77  Pseudonocardia
WP_014742458    7 lRLGISDVAPVVSCGSFSTRAVVGEHLPITATVFREGHDAVAADVVLTppgGDP-AGRQVVRMVrfgpE---PDRWTATV 82  Modestobacter ...
WP_014377588    7 lRLGITDVAPVVSCGSFSARAVVGEHLPITATVFREGHDAVAANVVWTapgEDG-SPAPFVRMAklppE---PDRWIAGV 82  Blastococcus s...
jgi:Gobs_4100  19 lRLGITDVAPVVSCGAFSARAVIGEHLPITATVFREGHDAVAADVVVTg--pDG-SRQPFNRMErfgdQ---PDRWLTTV 92 
7MEL_A         93 TAGETGTWSYTVEAWGDPVTTWRHHARIKIPAG------LDTDLV---LEEGARLYERAAadVpgr---edrRELLAAVD 160 Streptomyces c...
8_pfamImport   75 RVGRPGDYSFHIEAYDDRWGTWRHNAGIKFSVG------QDIALV---CLEGLQLLDEARdaAraagddaavTLLEQAAS 145
WP_013138739   76 PLETQGLWQFRVDAWRDPYTTWRGHIEAFLATSsgdvepTPHANE---AEEGARILARAQelArgs----erKTLAAATR 148 Segniliparus r...
WP_013224467   78 APDTTGLWTFRVDAWGDPWATWEHNVEVKVAAG------QGPEDLandIENGARLIERVS--Rrpdr-rgdkALLIGAVK 148 Amycolatopsis ...
6_pfamImport   75 APDTTGAWTFRVDAWSDPWSTWLHAVEVKVAAG------QGADELandLETGARLLDRVS--Rrpdr-rrekPLLSNAAA 145
WP_025360696   77 VPDAEGMWTFRVDAWSDPWATWLHAVEAKLGAG------QGAAELandLELGARLVERVG--Krpdr-rsarGQLVEAAA 147 Kutzneria
WP_013673896   78 VPDEPGLWTFRVDAWSDPWATWRHGVQAKMAAG------QTADEMandLEIGARLLQRVG--Rrpse-ranrDLLFGAAN 148 Pseudonocardia
WP_014742458   83 VPSSEGLWTYQVEAWDDPLGTWHHDIEVKVEAG------QGPEELandLESGARLLDEVA--Atapa--ehrEALTAAAT 152 Modestobacter ...
WP_014377588   83 VPDREGRWSFGIEAWSDPLATWKHAVEVKVEAG------QGPDELandLEEGARLLDRVA--Aeadg--ewrNRAAAAAA 152 Blastococcus s...
jgi:Gobs_4100  93 VLDREGRWTYRVEAWSDPLATWHHAVEVKIAAG------QGPEELandLEEGARLLDRVA--Aeada--dwrDRVAEAAA 162
7MEL_A        161 ALrdesrpAASRLAAALTPQVDAVLARHPLRDLVTSSDPLPLLVER 206 Streptomyces coelicolor A3(2)
8_pfamImport  146 QLdpe-qpMTVLASLPTREDLHQAMVRWCPRRLATPTREFPLVVHR 190
WP_013138739  149 RLrcp-gsLRARAELAVSADVVAIMRRHPVRELVTRGRTHRVFVER 193 Segniliparus rotundus
WP_013224467  149 ALrdeersLAERIGPALSPEVRQVMHEFPVRELITKGKPHKVWVDR 194 Amycolatopsis mediterranei
6_pfamImport  146 ALrdegrpLTERVAPALAADVRRVMHEHPVRELVTKGKQHRVWVDR 191
WP_025360696  148 ALrdtgrpLPERVAAALSEDVRRIMHEFPVRELVTKGKAHKVWVDR 193 Kutzneria
WP_013673896  149 ALrdhalpLHARVAPAMFPAVHTIMTERPVRELITRGRAQQVYVDR 194 Pseudonocardia
WP_014742458  153 ALrdrsleLTARIAPALSPSLQRVLHDHPVRRLVTGSQVVELWVDR 198 Modestobacter italicus
WP_014377588  153 ALrdssqeLTVRIAPALAAGLQRYLHDHPVRELVTRSPRYEVFVDR 198 Blastococcus saxobsidens
jgi:Gobs_4100 163 ALrdtsreLPARVAPALAEAVQRYLHDHPVRELVTPGPECEVWVDR 208
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap