Conserved Protein Domain Family
DUF3408

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pfam11888: DUF3408 
Protein of unknown function (DUF3408)
This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 128 to 160 amino acids in length.
Statistics
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PSSM-Id: 492200
Aligned: 20 rows
Threshold Bit Score: 107.875
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_009228536  12 EAKLKEMAEDGVMKTppketvsf--dppdeeeDMKIEVSVNQKENQ-HLVKELMPTSEDKQDETLCKSHERgyerrvetp 88  Prevotella sp. ...
WP_013407022  15 EELMMNLMVDGVKKeg--------------lqLPPELSEEPQK-----EEVKTNELPKDKPTV-KEKSRAK--------- 65  Leadbetterella ...
WP_013632716  15 EAYLMSIMAGETKKpqq-------------avTPQEPMAEPPK-----------ETPTEKPVT-KERTRQK--------- 60  Sphingobacteria...
6_pfamImport   4 EELMMNLMVDGVKKeg--------------irLPPEPPEVREKEVA-KEGVKREESPRNKAVQ-REKSRAR--------- 58 
4_pfamImport   4 EELMMNLMVDGVKKdg--------------lqLPPEPAEEQEKEEI-QNEVRQDELPQSKPVQ-RERNRTK--------- 58 
3_pfamImport   4 EAYLRSLMAGVPSEPplssvpstgggngenreTALSDEKGKADGTA-NETVRDVSDAGGADRSEVVTEKTSpk-----ti 77 
1_pfamImport   4 EELLLASIGRRTQDGtlrpaqevpaaapteedTAAPEPSPVQPVTR-EKAQRES--------------GRR--------- 59 
EGJ71487      11 ENFMKEII---SQGLpmkqkee----svmertIPTVKVEQSSSPIF-KNNSMPTLDL----------------------- 59 
EGJ72312      11 ENFMKEII---SQGLpikqekv----svkertIPTVKVEQSSSSIV-KNNSMPTLDL----------------------- 59 
Q7MW29        11 PVAIRELI---SQGIpmk--------------rkESEIKRSQSEEQcVESECPNDEPMSKDFSRVSRRERR--------- 64  Porphyromonas g...
WP_009228536  89 RTSLEDYRTRYLQSVRLRER--TNFTMSADTLQVLRNILQDLG-ERVSMACYIDNILREHLKEHKELLNN 155 Prevotella sp. oral taxon...
WP_013407022  66 KVSDADYESIFFRRPDTNARdgKTVYIRPDFHEKLSRIVQVIGeDKITIYGYLDNLLDYHFQEFGEQITK 135 Leadbetterella byssophila
WP_013632716  61 RASDMGYGERFLNSHTMTRRgdKSIYIRQEYHERLSRIVQVIGeDKIPLYAYLDNILEHHFEQFEKAIID 130 Sphingobacteriaceae
6_pfamImport  59 KNLDGSYGDHFLKSHAMTKRgdKSIYIRQEYHERLSRIVRVIGkDEIPLYAYLDNILEHHFEMFEKAITD 128
4_pfamImport  59 KSLDGSYGEHFLKTHSMTKRgdKSIYIRQEYHERLSRIVQVIGkDAIPLYAYLDNILEHHFEMFEKAITD 128
3_pfamImport  78 RTALADFIRRFLTPYKCEGR--QGVYIDKELHQKISVIVGIAGkRQLTVGNYIDNVLKEHFEKHADEVKT 145
1_pfamImport  60 KRQDEDYNELFLRRNEIKTR--QCVYISRDVHGKILRIVNDIAgGEISVGGYVDTVLRQHLEQHKERINE 127
EGJ71487      60 QSNTANYEETFFHKMELPDR--RSVYVSNSTHEKLTRIATILGmGKATVSSYVESIIQHHFDKHKDEINE 127
EGJ72312      60 QSNLTNYEEAFFHKMELPDR--RSVYVSNSTHEKLTRIASILGmGKATVSSYVESIIQHHFDKHKDEINE 127
Q7MW29        65 KSDKGDYESLFICRNTLKNR--KTIYIAKELQDTLAEIVMSMRnRDMTIGIYVENIILHHLETYKDEINR 132 Porphyromonas gingivalis
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