Conserved Protein Domain Family
DUF3396

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pfam11876: DUF3396 
Protein of unknown function (DUF3396)
This family of proteins are functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are typically between 302 to 382 amino acids in length.
Statistics
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PSSM-Id: 403171
View PSSM: pfam11876
Aligned: 21 rows
Threshold Bit Score: 195.984
Threshold Setting Gi: 309397511
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q63LF1              138 AMEFVTFCLEDWQAAL-NRGLDVLSFSVPPAFLTLC--PNVFQALFAQAADDLDAVHGHAGYAVNLSLLRRDp--NEASE 212 Burkhold...
WP_015876338        136 FFEYTVFCQSDWKAAL-RIGLDVLDFTVPRAFLVQQ--PGIFEAMFNAFAEALPTVHGHAGLAVNLPPMGREp--NEAGE 210 Burkhold...
goetting:MIM_c29130  89 EWRFMFFSRPIQNAEYhPEDTDYLEFSVPVSFLRNF--PHVFESMFIRFADRIGNMNGYAGYAMNLSLTREKn--NQPTE 164 Advenell...
Q9I5B8              124 AWLFDIYGKRSWQAKM-GHDLSVLEFSVPLLYQERQ--PLDFLQLFIDFARRLEPEQGYAGHAYNLSPTSWDn--DEPSE 198 Pseudomo...
PNU:H681_06440      124 DWHFEIFGQSAWEARI-GRDLSVLEFSVPLLYQEQN--PLNFLRLFLDVARRLAPEQGYAGHAYNLSPTSRDn--NEPTE 198 Pseudomo...
CAN94309            112 hfmiggLGAPKWESDR-RGDLGFFSFALPITWFADR--PGGFPSLLFRFCERIQPVHGYGGFGLVQSPNRFLnqlHEKTV 188 Sorangiu...
Q7MB74              118 KYLMRYLDSREIDG---DDGSSYLSLVLPWDYLKEQegMTRFMAWLDFLCEQLEPDSGDCGYCLVLPKDYYD---YFPLE 191 Photorha...
Q87X87              116 lYSLFVMNTSQGQA---DNDRSCLKMVLPWSYLTEPdgLKNYETWIRYLSSEVQAEHGFGGLACVLPCDGHQ---YLPWE 189 Pseudomo...
goetting:EBL_c11890 114 DYSILVMNTRIFHN---ENDRSVIKLTFPLSLLKEPdgNTHYQAWIMWLCESFAVESGYAGLSFVLPYEFHR---MFPYE 187 Shimwell...
KFD05909            108 DYAISIMGKRIFHN---DNNRSVIKLTFPLSLLNEEdgPKRYQDWLLWLCNEFEVESGYAGISFSLPQEFHR---MFPYE 181 Rahnella...
Q63LF1              213 YFLARRYgPGLDVGDPVRRGVRRLt--NRIKTVDWLTAINADMVRELGGRQSL--ALPPDWFGLRSYGNDGLLIQAGVA- 287 Burkhold...
WP_015876338        211 YFYSRRFgPGIDVGNPARLNIRALe--NQIKTVDWLTALSGPLVQAVGGATSL--ALPPDWFVRQPLGADGSVIQAGVA- 285 Burkhold...
goetting:MIM_c29130 165 ANLTRIF-NALDIGENLMISGRRDm-rKHLKTMSWLTLLNQEMLQEVGGVTGLrkYLPEQWYAFYKDPKIGLLIQTGNY- 241 Advenell...
Q9I5B8              199 AFMAARM-PGLDVGTACLLANTPEfkpTRIKTVSWLTLLNNERLALAGGLDALraQL-PSSHFAFYRYGDGVVIQAGAY- 275 Pseudomo...
PNU:H681_06440      199 TFMAARM-PGLDVGTAGLLANIPEfkpTKIKTVSWLTLLDHARLELAGGMEALraQL-PSSHFAFYDYGAGVVIQAGAY- 275 Pseudomo...
CAN94309            189 YALAMRH-PGLEIDYPITHSLWLR---DGIKGVNWLTILGERWLAALGGASALgqAL--GGTAELRELQGGALVMAGPH- 261 Sorangiu...
Q7MB74              192 YQLAQRY-PALQVNSAVHTAKLQYg--HSIRGINWITLLSKRFVNRLGGEFWIrqVLRPYRDVVITSYRDGLIIRAGEY- 267 Photorha...
Q87X87              190 YRLAQDH-MGLMVDPNPHIESLRLl--DRIKGVSWYTVLGESFVRQLGGSDRLrgQMSPHRDIVFHSYSNGLLIRAGAV- 265 Pseudomo...
goetting:EBL_c11890 188 YKLAQRF-PGVMVDSLGTLEGGEAv--EGLKGPCWYTILGNPWLEKLGGAEKLahRLNNTSEIELLPYNGGLILKAGVLp 264 Shimwell...
KFD05909            182 YSLAQRF-PGVMVDSIGMLEGGDAv--EGIKGACWYTILGNRWVEKLGGVSFVnkMVADTPEIAILSYNQGLILQASQQp 258 Rahnella...
Q63LF1              288 PQTGIAGEKGqapePPPAYVLVNQALRPLIA--DAVGTLQSGTPnstapllntevSTEAWLHRF 349 Burkholderia pseudomallei
WP_015876338        286 PESGVSAGPGlppnAPAAYVVLNAALRPIVA--QTLDTLQSGTInstapllnsavASDHWLQRF 347 Burkholderia glumae
goetting:MIM_c29130 242 PSLVSNKEDP----MLASYVLLNHALRKARL--ESIGPLHSVPDyqayf--ldrhTSNKWLTRF 297 Advenella mimigardeforde...
Q9I5B8              276 PYIAGDAEDS----RPAPYVLLNHALKGIRY--ETIGSLHGGSHdgelr--lvgwAADQWLKRL 331 Pseudomonas aeruginosa
PNU:H681_06440      276 PS-GGDGEDP----KPAAYVLLNHVLKGIRY--ETVGSLHGGSHdgelr--lvgwSADQWLKRL 330 Pseudomonas sp. ATCC 13867
CAN94309            262 PELGDTNRAL----YPVSYGPVSRALKPIRV--KTHPRVHSMGPfg-------keEFEAWLARL 312 Sorangium cellulosum So ...
Q7MB74              268 PDL-----TPlpgsVPESYFAINQLIRPIRVipREGHSLHFYgegh-----fnstSTLAWYARY 321 Photorhabdus laumondii s...
Q87X87              266 PELGGRGLPP-----PQPYVTVNRVIKPIRL--QDTGNLHPYLGsgng---ftdeTTAQWYARF 319 Pseudomonas syringae pv....
goetting:EBL_c11890 265 PGLGETKTEE----LPPLLVKVNQLIKPIRY--DGHNGLHFYCEyenfq--feeaSSMAWFARF 320 Shimwellia blattae DSM 4...
KFD05909            259 PGLGEINDEG----LPSLLVKVNQIIRPIRQ--DGHNSLHFYSMednhq--fnkeSSMKWYARF 314 Rahnella aquatilis CIP 7...
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