Conserved Protein Domain Family
T1RH-like_C
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pfam11867: T1RH-like_C 
Type I restriction enzyme HindI endonuclease subunit-like, C-terminal
This domain is found at the C-terminal of Type I restriction enzyme HindI endonuclease subunit (also known as R protein) from Haemophilus influenzae related sequences from bacteria and archaea. This domain is typically between 255 to 340 amino acids in length and its function is unknown. This domain is found associated with pfam04851, pfam04313.
Links
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Statistics
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PSSM-Id: 492180
Aligned: 83 rows
Threshold Bit Score: 225.87
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_231859148  701 DQDDQTLGREIDRAISEVYNEVAVLNAMLAPVKWEKLladLSNNKRWIQAVHQAANFLRNPLtpgnkvegdakPLHKRFR 780  Actinoplanes ...
CDC98774      317 ggDMGDNVETIEQSVTMVKDELDILRRMFHTFDYSKFs--TGTPLEQLECLKHAAEFVQVTE-----------NTQNQFM 383 
WP_013632339  706 nqTADDDFEDISQAEIIVRDQIDLLRQFFYKFDASKYy--DGLPVERLQCLNNASELVLQTE-----------ESEKFFV 772  Pseudopedobac...
WP_014203855  707 skvDSQNFEDIQQSVVVVKDHLDLLEAIFHKFDYSKYf--DGSPVEQLNTLNKAAEYIQATQ-----------DLEKRFM 773  Owenweeksia h...
WP_013163228  741 nQADRQNIEEIGQSLVVVRDHLDLLGRIFHRFDTTPYf--RGSPVAQLNCLNQAAEYVQITD-----------KIEKRFM 807  Desulfurivibr...
WP_013011913  708 sKADQSNIEEIEQSIVVVKDHLDLLSKIFHKFNTIPYf--QGSALEQLHCLNMAAEFVQVTQ-----------ELEKRFM 774  Denitrovibrio...
WP_014959072  732 aKADTANFEDVKQSIVVVRDHLDLMRAIFHKFDSTLYf--FGQPMEQLHCLNMAAEYVQITG-----------DLEKRFM 798  Desulfobacula...
WP_014770784  730 NKGERENFEDIQESLIVVRNHLDLLAKVFHKFDSSKYf--GGAALEQLNTLNMAAEYVQLTK-----------DLETRFM 796  Belliella bal...
WP_013687538  707 SKQDGTNFEDIAQSVVIVKDQLELLANLFHTFDSSGYf--SGTPISQLETLNKAAEFVLVTR-----------NQEKRFM 773  Fluviicola ta...
CCY34410      721 ygGEVGPQEDLDTAHEILKNELQLLQERLSGLSFKRFf--GDNDLARLQFIQEAAEYILANSve--------rKGEVSFL 790 

WP_231859148  781 ES----SSRLEQFHAICANSRDfrdraddFDRLRRDIQFFTAVRIMMVKLDAaareaEGLPRtaEVQWYLAQLAAEAVDA 856  Actinoplanes ...
CDC98774      384 GH----AKKLKSAFNLCSNHETi------SDKDREDIHFFTGVRSIIYKLTK-----GNAPDasQMNRKVSQMIAEALKS 448 
WP_013632339  773 NV----TKKLKSAYNLVSGSELf------ALREVDEIHFYFAVKSIVVKLTK-----GEAPDtaQMNEKVAKLVEEAIIS 837  Pseudopedobac...
WP_014203855  774 QL----VKRIKAAYDICSGSESl------SNKEKDHIYFYIAVRSIVFKLTK-----GEAPDtaQMNAKVREMIKDAIES 838  Owenweeksia h...
WP_013163228  808 HL----VKRLKAAYDICSGAEEl------SREERDRIHFYLAVRSIVFKLTK-----GDAPDtaRMNARVRELIGEALQS 872  Desulfurivibr...
WP_013011913  775 YL----VKRLKAAYDICCGSDAf------SQAERDLIHFYLAVRSIVFKLTK-----GDAPDtaQMNAVVTKMIKEALQS 839  Denitrovibrio...
WP_014959072  799 FL----SKRMKAAYDICVGCDEf------VQEERDHVHFYLAVRSIIFKLTR-----GDAPDlaQMNARVQQMIAKALQS 863  Desulfobacula...
WP_014770784  797 GL----VKRLKAAYDICAGSEHl------TQKERDYTHFYLAVRSIVFKLTK-----GSAPDtaQMNARVREMIKDALES 861  Belliella bal...
WP_013687538  774 DI----VKRLKSGYDICSGANEf------SDTQRDHIHFYLAVRSIVFKLTK-----GNAPDteQMNRKVREMIKDAIQS 838  Fluviicola ta...
CCY34410      791 KLfkehVKRLRSAYNICNPAGIl------TDEEIAWSQCFMGICSYVNKMTA-----TEH-DteSMNRHVEQMVQEAILA 858 

WP_231859148  857 AEITDIYAEAGLGRLDITDLNEAAVQRLENSETPHLAAEALRRLIQQKMREVTKHNVVRQESFSARLEALMTRYMKQQ-- 934  Actinoplanes ...
CDC98774      449 DGVEEVAQVNANTK-DLDLLSKDYMTRLEKLKLPNTKVKLMEKLLRTVITDFKKVNKMKGVDFTKRLNALVQRYNDRS-- 525 
WP_013632339  838 EGVEEIFKLDDHKANTIDLFNDKFIEKIANLELPNTKIKILERLLKQAIGDFKKVNKVKGQDFSVRLQTIVNRYNERS-- 915  Pseudopedobac...
WP_014203855  839 EGVQEIFKLGEDEQKEVDIFDENYLAKIDKIKLPHTKIKLLQKLLAKAIDDFKKVNRIKGIDFSKQMQTIVDRYNERK-- 916  Owenweeksia h...
WP_013163228  873 EGVEEIFRLGEDKAGEIDIFADDYLARIEKIKLPNTKIKLLQQLLARAIEDFKKVNKARGVDFAKKFKALVDVYNQRK-- 950  Desulfurivibr...
WP_013011913  840 DGVEEILKLGEDQGQEIDIFDDNYMAKIDKIKLPNTKIKLLQQLLTKAINDFKKINKMKGTDFSKKFKALVDKYNERK-- 917  Denitrovibrio...
WP_014959072  864 DGVEEILKIGQGDIAEVDIFDPDYMAKIEKIKLPNTRIKLLQQLLAKAIEAFKKVNKLKGVDFSKQFKALVDKYNDRS-- 941  Desulfobacula...
WP_014770784  862 DGVQEIFKLGDETQSEQDLFSEDYLAKIDKIKLPHTKIKLLQQLLAKAIGEMKKVNKVKGIDFSKKMQALVERYNERK-- 939  Belliella bal...
WP_013687538  839 DGVEEIFKLGEDTASEIDLFDDDYLNKINKIKLPHTKIKLLQQLLQQAIGQLSKVNKIQGINFSDKLKFIVDKYNERK-- 916  Fluviicola ta...
CCY34410      859 SGVERVMNDGVEE----NIFSDSFSKEVEEIKMPFTKFQILCKLVAKAIRAYSRTNKIQAEHFQKMLEETIDAYNTRDkl 934 

WP_231859148  935 LTSAQLIA-------------------ELVAMAKEVSAEARRgehfDppLTVPELAFYDAVAQHDLAKAVM-GDDELAKI 994  Actinoplanes ...
CDC98774      526 --DNAVFAeevln----------evakQMAELLKEVNKEKKSfkdlG--ITYEEKAFYDILKEIAHKFGFEyPEDKLLTL 591 
WP_013632339  916 --ERDVLDydgiq---------adtaeQMLDLIIKLRIEMDSfhdlG--IDYEEKAFYDILYMICKQYGFEfDKDKMLEL 982  Pseudopedobac...
WP_014203855  917 --ESDVLRsevle----------dftdEIIDLYHAMKKEKESfqgmG--IDFEEKAFYDILKELANRYDFAyPEDKLIHL 982  Owenweeksia h...
WP_013163228  951 --EDEVLRsnvle----------dfstEIIDLIQALKKERDSfadlG--IDLEEKAFYDILKDLTIKYDFIyPEDKLLTL 1016 Desulfurivibr...
WP_013011913  918 --EDSILVssvle----------dftdEIIDLYNALKKEKESfnemG--IDFEEKAFYDILKALAIKYDFTyPEDKLLAL 983  Denitrovibrio...
WP_014959072  942 --EQDTLEskvle----------dftdEIIDLYHAIKKEKESfaelG--IDFKEKSFYDILKTLTIKYDFQyPEDKLLDL 1007 Desulfobacula...
WP_014770784  940 --EDDVLRsevye----------emaeHLTNLIWEVQKEFSAgdelG--IDFEEKAFYDILKDLCIKYDFKyPEDKLIVL 1005 Belliella bal...
WP_013687538  917 --ENDVLQsqvle----------dftdEIIGLYYAMKEEKDSfkdlG--IDFEEKAFYDILKALANKYDFSyPEDKLIHL 982  Fluviicola ta...
CCY34410      935 TFTNDVTqnvvndvydivsykinglsnKLMTILKELKTDSEKfkvlG--ITFEEKAFFDVLVEVRDKHGFEyADDRCIEL 1012

WP_231859148  995 AREIVATIRAKITV-DWYSREPVRAKLRNFIRRVLVKYDYPPDHERAAVDLVLRQLETFATE 1055 Actinoplanes missouriensis
CDC98774      592 AAAVKKMVDDKSKYtDWANRSDIKAELQMDLILILAEHGYPPVPQDEVFKEIFEQAENFKKy 653 
WP_013632339  983 AKEIKIIVDNTAKYpDWADRDDIKAQLKMDIIVKLHQYGYPPITQDDVYKNVLEQAENFKRN 1044 Pseudopedobacter saltans
WP_014203855  983 AKEVKNVVDDKAKYtDWSKRADIKAELKVDLIILLAENDYPPIDRDEVYKEIFEQAENFKKy 1044 Owenweeksia hongkongensis
WP_013163228 1017 AKAVKEVVGEKVKYtDWNQREDIKAELKVELILILAKHGYPPVDRDEVYREIFEQAENFKKy 1078 Desulfurivibrio alkaliphilus
WP_013011913  984 AKEVKQVVDDKAKYtDWSQRTDIKAELKADLVVLLAENDYPPVDRDEVYKEIFEQAENFKKy 1045 Denitrovibrio acetiphilus
WP_014959072 1008 AKKVKVIVDDKARYtDWSQRVDIKAELKADLIILLAESGYPPVDRDEVYKKIFEQAENFKKy 1069 Desulfobacula toluolica
WP_014770784 1006 AQAVKDLVDSQAKYpDWSKREDIKSALKVGLIILLDEHGYPPVERDEVYKDIFEQAENFKKN 1067 Belliella baltica
WP_013687538  983 SKKVKTVVDDLAKYtDWSKRDDIRAELKVDLIILLAENDYPPVDRDEVYKEIFEQAENFKKN 1044 Fluviicola taffensis
CCY34410     1013 AKKIKALIDDTAIYaDWLNNDNLKSKLASQLTFLLYKEGYPPQWDEEVFQKVLEQVENYKky 1074
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