Conserved Protein Domain Family
Pullul_strch_C

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pfam11852: Pullul_strch_C (This model is not part of the current CDD release)
Alpha-1,6-glucosidases, pullulanase-type, C-terminal
This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate.
Statistics
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PSSM-Id: 519918
Aligned: 62 rows
Threshold Bit Score: 184.311
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012488738  969 KQTNNWAVGLPPRKEGMPSDAQILSAF--NDVNSKPSPEHIEFAGEIFKEMLAIAKNSPLFSLQTAQEVFDRVGFQDGGK 1046 Cellvibrio ja...
XP_002954985  802 ASSHNFGVGLPVATKNGGAWGYMRALLgqAD-RIRPSRQQMISTTKIFQALLRVRYSSPLFRLAATADVVRQVAFYNTGP 880 
Q6PYZ0        887 GETHNFGVGLPPARKNGDRYAFITEML--ADLSMRPTKENIHAATKNLCELLSIRRSTPLLRLRSSHDIQRRMKFYNRGP 964  Ostreococcus ...
XP_001415537  888 GDTHNFGVGLPGEQKNGDRYDFITPML--ADTSMRPSKEFIEEATRNFCELLSIRQSTPLLRLQTTRDIQRRMKFYNRGP 965 
XP_003055653  858 GDTHNFGIGLPGREKNGDRYPYISHLL--GDLSSRPSKEEILRASDHFRECLAMRRSSPLFRLRALDEINRRCTHYNVGP 935 
EFJ37579      717 YETNNWGVGLPPKSKNGEKWPIMRKLL--GNESLRPSKDHILAAVANFQDLLKIRFSSPLFRLKTVNAIQARLQFHNTGP 794 
ERN00508      778 YESNNWGVGLPPKEKNGNNWPLIKPLL--ANASYKPLKSQIISAVQNLEDLLRIRYSSLLFRLQTADSIQERVRFHNTGP 855 
Q8GTR4        792 YSSNNWGVGLPPKGKNEHNWPLIKPRL--QDPSFKPKSSHIVATLHNFLDLLRIRYSSPLFRLDTARAIQERVRFHNTGP 869  thale cress
XP_002532780  793 YNSNNWAVGLPPQKKNEKNWPLIKPRL--ADPSFKPQKHHIVAATENFLDVLQMRYSSPLFRLTTANAIQERVRFHNTGP 870 
XP_002271820  783 YNSNNWGVGLPPKEKNEKNWPLIKPRL--ADPSFKPQKNHIIAAVENFLNLLKIRYSSPLFRLRTANSIQARVRFHNTGP 860 
WP_012488738 1047 SQKAGVIVMSIDDgagvvsgtedvqrADLDPALDAMVVVFNGTTTAQTLTV--PT----ATG--FELHDIQKNS-VDEIV 1117 Cellvibrio ja...
XP_002954985  881 DQKPGLIVMELVSapysd---gdafqGVYDPMYERLVAVFNCAPYTNDVPYppGV----APGgsLQLHPDLAGV-GDPRL 952 
Q6PYZ0        965 AQTPGLIIASINDgdas-----tpglQALDSNYKRIVLAINATPRRISHEE--AGlkvdFAGveLKLHPLI----SDAVA 1033 Ostreococcus ...
XP_001415537  966 AQTPGLIIASINDgdas-----tpglPSLDANYKRVVLAFNATPNEISHHE--AGlkvdFAGvdLELHPLVGGVtADAVA 1038
XP_003055653  936 LQQPGVFILHISDdpa-------dgvREICPHFKRVLVCVNVSPHTKPIVD--ENlkvaLAGseMMLHPLQGKVsPDAYL 1006
EFJ37579      795 AAIPGIIVMSIHDgdeg-----epglLQIDSIFRIIVVVINARPDEGILKV--GL----LRGfkLELHPVQAAS-QDELV 862 
ERN00508      856 SSIPGLIVMSLEDghmg-----mpglTQIDPIYSFIVVTFNAQPHEVAFTI--HA----LRArmLQLHPIQLAS-GDNLV 923 
Q8GTR4        870 SSIPGAIVMSIEDghrg-----ipsvSQIDPIYSLIVVIFNARPSEFSYPS--PA----LKDrkLELHPVQVMS-ADEIV 937  thale cress
XP_002532780  871 SWIPGVIVMSIEDgheg-----fpglSQLDPIYSYIVVIFNTRPTKVSFTS--PA----LRArtFELHPVQVKS-ADEVV 938 
XP_002271820  861 SWVPGIIVMSIEDgheg-----vpglSQLDPVYSYIVVIINPSPTEIKFAS--PA----LQArtLQLHPVQVMS-SDGVI 928 
WP_012488738 1118 ----RNASFAEAVndeigGNFTVPAFTTAVFVK 1146 Cellvibrio japonicus
XP_002954985  953 ----SAATADDVH-----RKLHVPPRTTAVFVQ 976 
Q6PYZ0       1034 ----AESSVVD-------GAYTIPPYTWAVFVQ 1055 Ostreococcus tauri
XP_001415537 1039 ----MRSVFIE-------GVPTIPPYTWTVFVQ 1060
XP_003055653 1007 dpgpGGCACEG-------GVPTVPPHTVAVFVE 1032
EFJ37579      863 ----KASSCDN-------GTFAIPKRTTAVFVE 884 
ERN00508      924 ----KCSLYEART-----GSFKIPGRTTTVFVE 947 
Q8GTR4        938 ----KKSVYDSFS-----GGFTVPARTTTVFVE 961  thale cress
XP_002532780  939 ----KNSRYEASS-----GCFTVPPITTSVFVE 962 
XP_002271820  929 ----KNSTYEASS-----GCFIVPPRTTSVFVE 952 
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