Conserved Protein Domain Family
GT-C_AftD

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pfam11847: GT-C_AftD (This model is not part of the current CDD release)
Alpha-(1->3)-arabinofuranosyltransferase, N-terminal GT-C domain
This domain is found at the N-terminal end of alpha-(1->3)- arabinofuranosyltransferase from Mycolicibacterium smegmatis (AftD, EC:2.4.2.47), which is involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan -peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. It catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. This domain shows mixed alpha/beta folds homologous to other solved GT-C glycosyltransferase structures.
Statistics
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PSSM-Id: 519916
Aligned: 30 rows
Threshold Bit Score: 670.948
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2JDU8          5 FMVLFLLQAPGNLTADTKLDVPLDPWGFMGRATHLWNSLAeFGYLPNQYVGYLFPMGPFFGAGDLLGIPAWVTQRLWIAL 84   Frankia casua...
WP_012920716   33 LVALCFHQAPGKIVPDTKLDLTANPGAFLARALHLWDPQGaFGQLQNQAYGYLLPMGPFHWLFDSLSVPDWAFQRLWWSL 112  Kribbella fla...
WP_014442001   27 LVVAAFIQRPGQTTFDTKLDLVENPIGFMARALHLWNPWAtSGELQQQAYGYLFPMAPFFAVGDALGIPAWITQRLWCAA 106  Actinoplanes ...
6_pfamImport    2 LTAIAFAQRPGQVTFDTKLDLAANPIHFMARALHLWNPEAtSGELQNQAYGYLFPMGPFFAAGQLLGIPQWITQRFWTAL 81  
WP_013154711   43 LGALAASIDPGRIVSDTKLDLTADPLGFMERALHLWDASY-FGQIQNQAYGYFFPNGPFHLLFDLLGMPDWLIQRLWMAV 121  Nocardiopsis ...
WP_012888209    3 LGAIAFNTAPDRIIAETKLDMALNPVGFLARAAHLWDGTF-FGHLQNQAHGYLFPMGPFYSLWLGLDMPAWNVQRLWMAS 81   Streptosporan...
Q82BH0         39 VFVLFLAVHPGRTTFDTKLGVALDPWQFLSDLGQLWHDRGgFGGIQDQYVGYAWPMLPYYGLCKLIHLPVWLAERLWFSL 118  Streptomyces ...
WP_003962567   42 VFALFLAASPGRMTFDTKLGVVTDPWRFLADLGVLWQDRGgFGGLTNQYIGYAFPMLPFHALADLAQLPVWLAERLWLSL 121  Streptomyces ...
2_pfamImport    1 -------QSPGLLVADTKLDLAVAPGRFLLRAVHLWDSIGaLGQLQNQAYGYLWPMGPFFLSGIESGLPAWVVQRLWLAL 73  
WP_011904110   32 LTALAFQQAPGLIVPDTKVDLNVNPAGWLLRSLHLWDPTGaFGQLQNQAYGYLWPMGPFFLVGSELGLQPWVIQRLWWAL 111  Salinispora t...
Q2JDU8         85 LLTVSAWGVVRLAEALRLGVPRTRVLAGLAYTLSPMFLGKIGATSVALAGAAMLPWITLPLILAlrpdgafgadtgtaat 164  Frankia casua...
WP_012920716  113 VLCTAFVGVWKLAGALGYGAPWARFTVALLYALSPRMLGEVAITSIEVWPIAMAPWVLLPLVTP---------------- 176  Kribbella fla...
WP_014442001  107 LFLAAYFGVLLLARALRIGNDAGRVVGAFAYAVAPRMLTEVGVLSSEMLPVAALPWVLLPLVTA---------------- 170  Actinoplanes ...
6_pfamImport   82 LLAAAFYGLLRLARAMNIGTEPTRYAAALGYALAPRILTEVGALSSETLSAAMLPWVLLPLVTV---------------- 145 
WP_013154711  122 LLVAAFTGVYKVAGALGIGTVNTRILAGVAYALAPRVLTLLSYNSAELQPMLLMPWILLPLVLGa--------------- 186  Nocardiopsis ...
WP_012888209   82 VLIAAFLGVVRVARELGIGSPRAGILAGLAYALAPHAQALIGVNSSEFLPSAILPWILLPLIRGa--------------- 146  Streptosporan...
Q82BH0        119 VVSVAFWGALRLAERLRIGTGPARLLAAVAYALWPVFTVVVGSTSAAALPGAFLPWVLLPLTNE---------------- 182  Streptomyces ...
WP_003962567  122 VVTTAFWGALRLAERLGVGTRPTRLLGAAVYALWPTFTIVVGSTSAAALPGALLPWVLLPLTDD---------------- 185  Streptomyces ...
2_pfamImport   74 VLCVAFLGAARLGRELGVRSDLACVLAGFAYALSPRMLSTLGQISIEAWPSAMAPWVLLPLVIG---------------- 137 
WP_011904110  112 LFCVAYLGVVRLAGSLGIGSPTGRMIAGVAFALSPRILTQLGWSSVESWPSAVAPWVLIPLIGL---------------- 175  Salinispora t...
Q2JDU8        165 tsttavddvdaaddpaldpGRRLSPRRaAALSGLAILGTGGINATVTLCVLLCPAAVLVFAgGTRRAWALRAwWVVAVIL 244  Frankia casua...
WP_012920716  177 -------------------RARSGWWR-VGWSAVAFALVGGVNAVATGATLVLPALWILTRrLDRATLKIAVgWFGCIVA 236  Kribbella fla...
WP_014442001  171 -------------------RRFASPRRaAALSALAVLFMGGINAAAVVMALVLPGLWLLTRrWDRQLFVLMAwWAGFVLL 231  Actinoplanes ...
6_pfamImport  146 -------------------RRIGSPRRaAALSALAVLGMGGINAAVVLMALVLPGVWLLTRrWDAEHRRLVAwWCVCVVG 206 
WP_013154711  187 -------------------RHGRSPARmALLSGLAFLLCGGTNAASELAVLVVPGLYLLTRaNGPRKWRLTAwWTVALVL 247  Nocardiopsis ...
WP_012888209  147 -------------------RGDTTPRRaAACSAAALLLCGGVNAAAELAVLVVPLLYLLTRrAGPLKRRLIAwWLPLVGM 207  Streptosporan...
Q82BH0        183 ---------------------RHSARVaAFRSALFIPFMGGVNAAATLASLLPVGLYLLSRpRGPRRRKLIGwWVLGVLL 241  Streptomyces ...
WP_003962567  186 ---------------------RYGARVtALRSAALIPFMGGVNAASTLASLLPVGLYLLSRpNGPRKLRLALwWVPGVVL 244  Streptomyces ...
2_pfamImport  138 -------------------STRGSARRaAAWAALAVVMVGGVNAAATFAVIPLGVLWILTRgRGRRQVTLLLwWPALTVV 198 
WP_011904110  176 -------------------ARGAPLRRaVAGSALAVACAGGVNATAVFAVVPLALLWLATLaPIGRRISAIAaWCGAVAL 236  Salinispora t...
Q2JDU8        245 ASAWWLLALMVQGRYGLNFLAFTETAQTTTATTSVAEALRGATDWLAYVQlp-rPWLPAATEYVSRPVPIIGSAAVAAIG 323  Frankia casua...
WP_012920716  237 VSFWWLVPLLLLGRHSPPFLDWIENAATTTNTASIFESFRGTSQWLNFLAtgggPSWPAGWLFVTQPTLILTTAVVALVG 316  Kribbella fla...
WP_014442001  232 TTLWWIIPLLLFGQYSLPFLDFIESSATTTAVTSLFQATRGTNQWVGYIVqg-ePWWPAGWSLIDNPALMVVTALVAALG 310  Actinoplanes ...
6_pfamImport  207 VCLWWIVPLLLLGQYSLPFLDYIESSTTTTAVASLFQAVRGTNQWVAYIVqg-ePWWPAGWLLIDHPVLMALTAVVALIG 285 
WP_013154711  248 ASFWYVAPLLLMARYVFSFMPYTEDAAVTTGVTSLLNALRGTSNWMGFLPdqgnTALPSGAELSTTPWLIAATALVAGLG 327  Nocardiopsis ...
WP_012888209  208 AAFWWLAPLLVMGSHIFSFLPFIETAAATSQVTSLTNVVRGTSSWLSFLQtdgrPWVEAAFAQATRPWLIVVTSLVAALG 287  Streptosporan...
Q82BH0        242 ATAWWVVPLLMLGIYGENFLPYVETARTTTDTMSAVESLRGAGNWVAYLHfg-eAWLPAGWTVASSVLVIVCSALAAGLG 320  Streptomyces ...
WP_003962567  245 ATLWWVIPLLLLRAYGENFLPYVETARVTTDTMAATEALRGAGNWVAYLHfg-dAWLPAGWSVAASVPVVVCSALAAALG 323  Streptomyces ...
2_pfamImport  199 GTLWWLVPLFVLGSYSPPFLDFIESASNTTFPTTLYDALRGTSNWVVYVG----STSRAGNDLLRDPIAILNSAAVVVLG 274 
WP_011904110  237 ATAWWLVPLLILGRYSPPFLDYIETAQSTTSVTDAVTTLRGASYWVAYLAspveQAIPGGARLANELPLILATLAVAALG 316  Salinispora t...
Q2JDU8        324 LWGLSRADLPARRFLLVTLAAGTVSVAAAYPGHPGSPLAGVVRDLLGDQLGFLRNVYKFQPVVRLPIALGIAHALTVRPV 403  Frankia casua...
WP_012920716  317 LVGLAMGSLKNRGFLQLSVVAGLLLLTLGHHS---SPLSGPVQDLLDGPLAALRNTHKFELVVRLPLALAAAHALTRLSS 393  Kribbella fla...
WP_014442001  311 LLGLGLRGLPEKRFLVIGALTGLALLTMGYVGTLDSPFAPLVRELLDGPLAPLRNVHKFEPVLRLPIALGLAYAASHAPV 390  Actinoplanes ...
6_pfamImport  286 LAGLAGNLLPQRRFLVAGFLAGLTLLTIGYVGAVDSPLSEVVRELLDGPLAPLRNVHKLDPVLRLPLMLGFAHGVDAVAT 365 
WP_013154711  328 LAGLVNRRTPERLFLIASLLTGTAVIVAGFTGDLTGPFAGTMRELFDGLLSPFRNVHKFDALVRLPLVLGLAHLPVVVAR 407  Nocardiopsis ...
WP_012888209  288 LAGLARRGTPERFFLLLTLLVGVAVVSAGHAG----PMAALTREALDGPLAAFRNLHKFDALIRLPVALGLAALVAAPV- 362  Streptosporan...
Q82BH0        321 LAGLARRDLPERRWLVLTVLAVALITLAGYGGSFGAPFHGVVQDWLNGWLVPFRNIYKFQTGLALALVFGLAHLLGVAAQ 400  Streptomyces ...
WP_003962567  324 LAGLARRDLPERRWLVLTVLTVALLTLAGYAGRFGAPFAGPVQDLLDGALVPFRNIYKFQPGLALALVLGLVHVTAVAQR 403  Streptomyces ...
2_pfamImport  275 LVGIGQRRNPERVFLCLSVLVGMLMVTMGHTGAAQGWFAADLQAALDGALAPLRNVHKFDPVVRLPLVLGLAWAVDALVA 354 
WP_011904110  317 VLGLSRRGMPHRRFLVTGLMLGAAMVGLGHVSDLPNLLAGPQQQFLDGIGAPLRNTHKFDVLLRLPLTLGLAHLVSLVVK 396  Salinispora t...
Q2JDU8        404 SLTARvrrwttrgasrrhgrTADMIVTVAvnvpVVLTVAALVcgmTPALAGRALQPRPFARVPDYWVAAADWLAAHPQD- 482  Frankia casua...
WP_012920716  394 WATARg--------------VQRRLVPAL----AACLVVSVA---TPAMFAQLPRTESYQAMPAHWSEAATWLDSQPTT- 451  Kribbella fla...
WP_014442001  391 LPRW----------------RIRVPAAPV----VAVLLIAAA---APAWTLLLRPGPGWSSVPSYWSQATTWLADQDAQ- 446  Actinoplanes ...
6_pfamImport  366 RMHHAlarr-------rpgvRLRPLVFVP----VLMLVLGAA---APAWLGLLRPGPGWADLPPHWRSAATWLADRDAL- 430 
WP_013154711  408 DLADRrgtp--------vsgRVRRTVAGA----TAAVLAATL---VPVGTVGIAPAGGFAQIPDYWYEATDWLEARADEr 472  Nocardiopsis ...
WP_012888209  363 --------------------RARLPLRAG----VAVLAGLSF---APVALSGVTTAGSFWQVPTYWREAVGWLNANATD- 414  Streptosporan...
Q82BH0        401 ARGARpv------------rGRRFAPLIA----AVLILPGLA---WPYLNGSVLQPGSFQELPRYWHTTADWLKKYSPD- 460  Streptomyces ...
WP_003962567  404 ERARRvpgh-------gvrwGRRYVPLLA----AVVVLPGLA---LPYATGAVLQPGSFTKLPAYWGDTADWLRKHSPD- 468  Streptomyces ...
2_pfamImport  355 QRRRApgpdad----rttatLDRVTAFGL----VLASVAAVAgaaLPAVLGRITPTGGFVAVPGYWSQTTDWLRERDA-- 424 
WP_011904110  397 AARTApaa----------rhKKAVARAWIttgvTMAAVAAVA---SPAIIGGIATPGSAREVPPYWQDAADWLDANTGP- 462  Salinispora t...
Q2JDU8        483 GRALVLPGSPFAEYEWGRPLDEPLQWLARTP-WGVRGLIPLGGTGVTRLMDGIEHQLATGS-AAGLAPALARAGIGQILL 560  Frankia casua...
WP_012920716  452 GSVLVVPAASFADFTWGSTKDEPFQALLKRP-MAVRDAVPLGSAGTTRWLDELERRLGSGVgDKTLVQALNRAGIRYVVV 530  Kribbella fla...
WP_014442001  447 DRTLVVPGSGFSQNTWGRTVDEPIQPLAESP-WSTRNQIPLGSEGNIRVMDTVEAVLAQGRgSPALADFLARSGYQYLMV 525  Actinoplanes ...
6_pfamImport  431 ARTLMVPGSGFGQYEWGRTVDEPLQALAGAP-WAVRHQIPLGSAGNTRMMDTVEEVLATGRgSTGLADLLARSGFRHLLL 509 
WP_013154711  473 GMTMALPGSARGEYEWGRPMDEPLQPLFEGA-WTNHQIIPWGSAGVSRVTHEIDQRVSSGRgSAGLADTFARMGVTHLLV 551  Nocardiopsis ...
WP_012888209  415 QMVLVVPGSRRGEYDWGRPIDEPLQPLLDGVrWAAHTNVPWGSPGIARLMQALDERFGAGKgSLGLGSTLRRMGIGYVLV 494  Streptosporan...
Q82BH0        461 SRALVVPATAHGIYTWGSPIDQPLDVLADSR-WAQRDYVPFGTPGNRRALDAVEQALMTGGeVPGLADYLSRAGLYYVVV 539  Streptomyces ...
WP_003962567  469 SRALVVPATAHGVYTWGSPIDQPLDVLARSP-WAQRDYVPFGTPGNRRALDAVEQALLTGAaIPGLRDFLGRAGLHHVVV 547  Streptomyces ...
2_pfamImport  425 -TALLLPGSSFGDYIWGYPQDEPIQPLARSP-WAVRNAVPLTPPGNIRMLDEIEARLAEGSgSPALASYLRRAGITHLVV 502 
WP_011904110  463 GRVLVVPGARRPAYDWGSTTDEIAQPLLESS-WAVRNSIPFTPPTTIRLLDAIEATLSSGAgSAGLADLLARSGVSHVLF 541  Salinispora t...
Q2JDU8        561 RNDLEQKNwDVPPsTDELHRALRSS-GLTLTAAFGPQVParasaKERLvPELRNPT---ARVPALEVWTVPGGa---KLV 633  Frankia casua...
WP_012920716  531 RNDLRNDV-QVSP-ALAVHESLAEA-GIARVAYFGPPTG-----SPIEePGLTLDErtrLPYPSVEIFDVGEV----SPA 598  Kribbella fla...
WP_014442001  526 RHDLDRTVsGAPP-ITVVRQAITNSpGLVEAATFGPRVGaggaaPSPAdAGV--------AVPAIEIFKVDRDv---PAV 593  Actinoplanes ...
6_pfamImport  510 RNDIDRIQvDAPP-VAVLRRALAESpGITRVATFGSTDAltrtiGSPVdEGF-------DTLPAIEVYQVDAPv---PAA 578 
WP_013154711  552 RNDLQRTGnNGGW-PARVHQALTDSpGITRAAEFGPVIG--------SlDHQSASQwfdQPYRALSVYEVEDAa---PTV 619  Nocardiopsis ...
WP_012888209  495 RNDLDRATiGDAW-PSRVHEALEETpGLSRVRGFGPQVG--------QeQSTIAATwldQPYDALEVYRVGGTp---MRA 562  Streptosporan...
Q82BH0        540 RNDLDPDQiGYVP-TTTVKRTLEQS-GFQRVTGFGPVMTggriaD----DTPMQVEglyPRQRAVEIYEPGTDvprpGQA 613  Streptomyces ...
WP_003962567  548 RNDLDPDQlGHVP-TATVKRALEQS-GYERVTGLGPVMTggriaD----NTPLQVEglyPRQRAVEIFAPAGDsrppGRA 621  Streptomyces ...
2_pfamImport  503 RNDLVRSG-DLPD-PVLVHQALAGSaGIFRVTSFGPEIGgaghiDTEDdSRIVVNGgwqASYPAIEVYAVAGA----ASA 576 
WP_011904110  542 RADLDHGRsDTTR-PAVVRQALQRSpGLTRVTTFGPIRG------GPEaVDDIPDQgldVPGRALEVYQVNRRv---EPV 611  Salinispora t...
Q2JDU8        634 GSYPADTAVVVSGGPEATVQLAGqgLLSSDRAAVLAADLAADRTdPSaavasstspaaikvapGEvigpttawVDTDTLT 713  Frankia casua...
WP_012920716  599 RVVPQSQLVEVRGGSEDVPSVLT--ALGPDREAVLSTDVGGLQL-PL--------------------------IQTDGLQ 649  Kribbella fla...
WP_014442001  594 SATAIAGVPVVSGGPESLLGVLEegLIDPAQPAVLAGDQDGELA-IP----------------EAag----qpIVTDGLR 652  Actinoplanes ...
6_pfamImport  579 SAVLTADVPTVSGGPESLLALLEqgVVERDRPVVLAGDRDGT----P----------------EAtge---swIVTDGLR 635 
WP_013154711  620 GTVPADEVLRVTGGPESVLHLAEqgVVDDDRPILLGDDPGAGEV-AA----------------QDt-------VVTDTAR 675  Nocardiopsis ...
WP_012888209  563 GTLPAGRTTRVTGAPEAVLTLAEqgLLDDDRPVVVGDDAAAYEI-PA----------------GDt-------IVTDTLR 618  Streptosporan...
Q82BH0        614 GLTPVAGTAVVSGGPESLLPLSAdpa-mrDRAAVLTGDSHPGLGaPE----------------MQ--------VVGDGLR 668  Streptomyces ...
WP_003962567  622 GIRAAADTAVVSGGPESLLPLSAdps-lrDRPTVLTGDRHPGVDtPA----------------LR--------ITGDGLR 676  Streptomyces ...
2_pfamImport  577 AARTSQVAPVVVGGPEDLLDLTAlgVLG-DEPTRLAFDVPADRD-PG----------------APv-------VLTDGLR 631 
WP_011904110  612 VAYDRKDVATVVGGPESLLDLAAagLLSPA-PTVLAGDADTDDL-SG----------------PV--------AMTDGLR 665  Salinispora t...
Q2JDU8        714 RRDSTFGLVHD 724  Frankia casuarinae
WP_012920716  650 RREVTVGRAAE 660  Kribbella flavida
WP_014442001  653 RRELNIGRMRD 663  Actinoplanes missouriensis
6_pfamImport  636 RRERDIGRVRD 646 
WP_013154711  676 RREVVYSDVRR 686  Nocardiopsis dassonvillei
WP_012888209  619 RRENVFSDLRR 629  Streptosporangium roseum
Q82BH0        669 RADTRFGLVNS 679  Streptomyces avermitilis
WP_003962567  677 RADTRFGLVNT 687  Streptomyces clavuligerus
2_pfamImport  632 AVERHFGRLHD 642 
WP_011904110  666 RREVSFGRSQD 676  Salinispora tropica
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