5MQF


Conserved Protein Domain Family
Myb_Cef

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pfam11831: Myb_Cef 
pre-mRNA splicing factor component
This family is a region of the Myb-Related Cdc5p/Cef1 proteins, in fungi, and is part of the pre-mRNA splicing factor complex.
Statistics
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PSSM-Id: 403131
View PSSM: pfam11831
Aligned: 77 rows
Threshold Bit Score: 128.156
Threshold Setting Gi: 829199099
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5MQF_L        404 TPNTvLSTP-FRT--PsNg--AEGLTPrsG-TtpkpvinSTPGrTPLRDKLNI------------NPEDgMADYSDP-SY 464 
XP_001608434  502 lkDKiINDIr----------------------------------SN-QKNASLyahsiisykmgrNENS-VLDKNTL-LS 544  malaria paras...
Q7KQL1        501 iKNKiISDIk----------------------------------SF-KKNISLyahsiisyknlkNDQS-MMDNQTIqTT 544  Plasmodium fa...
EFA82522      375 NP---VLNPs----------dFSGVTPkpQnMa-----sRTPLrTP-------------------NP---LAQGMTP-RQ 413  Heterostelium...
Q54WZ0        400 TPLKgGAGP------------NVSQTPlpKsVn-----nSTPFrTP-------------------NP----LANQTPtQH 439  Dictyostelium...
XP_006361426  406 TPNP-LLTPsATPgaT-SltpRIGMTPsrDsYg------MTPKgTPMRDELHI------------NEE--MDMHNNA--- 460  potato
EEF40377      407 TPNP-MLTPsATPgdA-GltpRIGMTParDgYsy----gMTPKgTPIRDELRI------------NED--MDMHDSS-KL 465  castor bean
EFH66028      407 TPNP-MLTPsMTPggA-GltpRIGLTPsrDgSsf----sMTPKgTPFRDELHI------------NED--MDMHESA-KL 465  Arabidopsis l...
XP_009418597  407 TPNP-MATPsATPg-P-GltpRIGMTPsrDgYsf----gITPKgTPFRDELHI------------NED--IEMQDTA-KM 464  wild Malaysia...
EES15997      405 TPNP-MATPlASPg-P-GvtpRIGMTPsrEgHsf----gLTPRgTPFRDELRI------------NEE--VEMQDST-KL 462  sorghum
5MQF_L        465 V------KQME---------RESREHLRLGLLGLPAPKNDFEIVL---PENA-E----KEl-E-EREIDDTYIEDAADVD 519 
XP_001608434  545 ElydedyEEKI---------DRAKLLIKSSLAHLPKESNVIELQI---PEDL-NeqesQInyEhVQ-----VEKDMQDIE 606  malaria paras...
Q7KQL1        545 EyyddnyEEKI---------DRAKLHIKASLANLPQETNLIELQL---NEEH-PecdtDNieKdEI------EKDIQDIE 605  Plasmodium fa...
EFA82522      414 QkqqnneDA-----------MATKHSIANGLKNLPAPVNKFQISL---PDEPtLeeidE---------DGQQILDQSEQE 470  Heterostelium...
Q54WZ0        440 NkkqslnDSNEfaiedkfkrQQGKNQLLSNLKNLPSPTIEYKLEL---PSEL-PtiedD----------TTLELDNSEIH 505  Dictyostelium...
XP_006361426  461 -------KLGQ---------FNSKKELLSGLKSLPQPKNEYQIVVqqpPEENe-------------EPEEKIEEDMSDRI 511  potato
EEF40377      466 E------QQRK---------ADLRRNLRSGLINLPQPKNEYQIVIqppPEDNe-------------EPEEKIEEDMSDRI 517  castor bean
EFH66028      466 E------RQRR---------EEARRSLRSGLTGLPQPKNEYQIVAqppPEDNe-------------EPEEKIEEDMSDRI 517  Arabidopsis l...
XP_009418597  465 E------LHRQ---------AELKRNLRFGLNNLPQPKNEYQIVIqpiPEEHe-------------ESEEKVEEDMSDRL 516  wild Malaysia...
EES15997      463 E------LRRQ---------AELKKSLRSGFASIPQPRNEYQIVMppiTEDEa------------eEAEEKIEEDMSDRL 515  sorghum
5MQF_L        520 ARKQAIRDAERVKEMKRMHKAVQKDLPRPSEVNEtILR-----P----LNVE-PPLTDLQKSEELIKKEMITMLHYDLLH 589 
XP_001608434  607 KEKKLEQLKREQERFNSQNKVIRWNLPRPYFLPKmNLTpsvpsP----PLPStAEDATSKEVESAVLNEMLLLIKNDMFN 682  malaria paras...
Q7KQL1        606 NEKRKNEERKEKEKFNKQNKIIRWNLPRPYFLDKiNLFnnymhN----EYE---------DVHNLIQREMLLLIKNDMFN 672  Plasmodium fa...
EFA82522      471 IREQQELKHKEQFRLRNRSLPLKKSLPRATTLPTqTAGlaiigK----AEEEqQQQLLQKEIDNLILNEMCGIIKHDDKC 546  Heterostelium...
Q54WZ0        506 IREQQQLKHKEQFKLRNRSTVLKRNLPRSRNLfp--------iN----KNNNnNNNNNINQDELRILKEINRIISHDNKT 573  Dictyostelium...
XP_006361426  512 AREKAEEEAKRQALLRKRSKVLQRELPRPPIASLeLIKsslmrAd--eDKSSfVPPTLIEQADEMIRKELVSLLEHDNTK 589  potato
EEF40377      518 AREKAEEEARQQALLRKRSKVLQRELPRPPAASLeLIKnsllrAd--gDKSSfVPPTSIEQADEMIRKELVTLLEHDNAK 595  castor bean
EFH66028      518 AREKAEEEARQQALLKKRSKVLQRDLPRPPAASLeVIRnsllsAd--gDKSSvVPPTPIEVADKMVREELLQLLEHDNAK 595  Arabidopsis l...
XP_009418597  517 AREKAQEQARQEALLRKRSKVLQRELPRPPTASLeIIKkmlmrGd--eDRSSfVPPTPFEQADEMINRELLVLLEHDNAK 594  wild Malaysia...
EES15997      516 ARERAEEQARQEALLRKRSKVLQRSLPRPPAASVeIIRqslirSgesrSRSTfVPPTSLEQADELINEELLRLLEHDNAK 595  sorghum
5MQF_L        590 HPYepsgnkkg---------ktvgfgtnNSEHI--TYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSE 655 
XP_001608434  683 YPM----------------------------KNgtPIQKRVPLDGVEETYMRMALQSVQAELHKMTPQEGEAVNPDG 731  malaria parasite...
Q7KQL1        673 YPL----------------------------RNstPVQNKVHVEDLENVYMNMAMKSINEEFEDMYGEASLNNNTKD 721  Plasmodium falci...
EFA82522      547 YPLe------------------------------gGTNDDNDYEYFSEKELKEAQKLLVTELNVVKQEQQEQLDEKE 593  Heterostelium al...
Q54WZ0        574 FPNdsitpsstfdddddddnhhhhhddiDNNSIndNDEKYENYDYFTNTELEFADKLIRDEIEQIKQELKQPLPSSN 650  Dictyostelium di...
XP_006361426  590 YPLdekpeke------------kkkgvkR------KIVAEPAIEDFEEDELKEADGLIKDEAHFLRVAMGHESESLD 648  potato
EEF40377      596 YPLddklnke------------kkkgakRSANG--SAASIPVIEDFEEDEMKEADNFIKEEAQYIRVAMGHENESLD 658  castor bean
EFH66028      596 YPLdekaek--------------kkgakNRTNS--SASQVLAIDDFDENELQEADKMIKEEGKFLCVSMGHEDKSLD 656  Arabidopsis lyra...
XP_009418597  595 YPIdektdek------------kkkgtkHLANG--KSSAIPELEDLEEDQLKEADSLIKEEIQFLRVVMGHENESFD 657  wild Malaysian b...
EES15997      596 YPLdektqke------------kkkgkrQQNGG----ALVPEIDDFDEDELKEASSMVEEEIQYLRVAMGHENESFE 656  sorghum
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