Conserved Protein Domain Family
RP-C_C

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pfam11800: RP-C_C (This model is not part of the current CDD release)
Replication protein C C-terminal region
Replication protein C is involved in the early stages of viral DNA replication.
Statistics
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PSSM-Id: 492116
Aligned: 27 rows
Threshold Bit Score: 106.171
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q07GS3        328 DIPMLMLTCPQFAELARDmeGYIRDWNGVHRAAGKVRPMVGISESAWNVAQQTLGPAVAAAALALIYDKHatGEV-SSPG 406 Roseobacter de...
1_pfamImport    1 SLDQVLRTCPDIRDYGIN--G-IGTWRELLDASRIVSGFLGISRSAYQEAVHFMGAESASTAIAWILQKL--ASI-NSPG 74 
WP_011982878  302 SLDQVLRSCPDIREYGAN--G-IGTWRELHDASRIVSGFLGISQSAYQEAIRFMGPETASTAIAWILQKL--STI-NSPG 375 Brucella anthropi
WP_012093716  290 SLDMVLRSCPEITAYAI---SSIRHWQDLANTAEKVRSFLGIDGKLYDLAKKTLGTHNTSIVIAYILQRY--EQI-QSAG 363 Brucella anthropi
Q2YIS0        290 SLDMVLRACPEIETYAS---GSIRIWQDLIETAGKVRIFLGIDNKLYDMATKTLGIHNAAITIAYILQRY--DHI-RSAG 363 Brucella abort...
Q5HXT6        321 TATFYLEICSNLRDFCS---TGRPSAEQLIEAAEYLSGQVGVTCHAWSQACVVLGRLQAAVAVIVMASRLerGAViRFRD 397 Gluconobacter ...
jgi:Acry_3518 346 TPDELVRLAPRLVPYLR---HPSPSWPEIVDAADWLRHDLGVSKPLWGEACLAMGREQAAIALALVSAKPp-GHFrSSPG 421
WP_011930733  346 TPDELVRLAPRLRAYLA---KSSPGWPEIVEAADWLRHDLGVSKPLWGDACLAMGREQAAVALAIVSTKPs-DHFrGSPG 421 Acidiphilium c...
WP_011982873  317 ALQDLIRATPALTTYGV---SRPRTWTELARLAPQICRIAGISEDARRRAVDQMGEQAAAIAIAITLQKLdeRQV-KSPG 392 Brucella anthropi
WP_012187065  318 DLPTIMQACPEFASWARNmgGFLKDWGDLHRVAGQLRPMIGISEHAWNVAQDRMGTQVATAAFALVFEKHsaGEV-ASPG 396 Dinoroseobacte...
Q07GS3        407 GYLRGMVEKAMVGELHLDRSFYGRLGE 433 Roseobacter denitrificans OCh 114
1_pfamImport   75 GYLRSLTEKARGRTFSISQLLFSGMNA 101
WP_011982878  376 GYLRSLTQKARGGTFSIRQLLFSGMKA 402 Brucella anthropi
WP_012093716  364 GYLRILTEKAANGSFSIRPMLMAALNG 390 Brucella anthropi
Q2YIS0        364 GYLRILSEKAASGAFSIKPLMMSAMCN 390 Brucella abortus 2308
Q5HXT6        398 AYFRSLIERGARNTLFLDRSLYALRDH 424 Gluconobacter oxydans
jgi:Acry_3518 422 GYFHGMVERARDGGLHLDRTIWGLRGA 448
WP_011930733  422 GYFHGMVARARAGELNLARSIWGIRAA 448 Acidiphilium cryptum
WP_011982873  393 GYLRAMTARAAAGELHLARSVFGLAAR 419 Brucella anthropi
WP_012187065  397 GYLRGMVEKAGAGELHLERSFYGRLSG 423 Dinoroseobacter shibae
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