1SP3


Conserved Protein Domain Family
Cytochrome_cB

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pfam11783: Cytochrome_cB (492103 is an unknown moldel)
Cytochrome c bacterial
This is a family of long bacterial cytochrome c proteins, found in Proteobacteria and Chlorobi families.
Statistics
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PSSM-Id: 492103
Aligned: 46 rows
Threshold Bit Score: 164.346
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1SP3_A       247 KMQWDWSTAGDDKp---------ETVDQYG----------------KHTYQKKKGNFVWEKMVKPQYAWYNGTANAYMAG 301 Shewanella onei...
WP_014959717 436 KTWWDWSKAGdkk--------rkPQKDKYG----------------KPDYNWKKGEFKWEESAVPDYAWDSGYMNRVLMG 491 Desulfobacula t...
ACL03517     339 KTWWDWSKAGdkk--------reVHKDKYG----------------MPDYFWKKGEFLWDESVQPTYAWYNGTVERYLIG 394
WP_006930454 264 KIWWDWSKAGMDIe----------PKEEYG----------------RETFNKKKGEFHWAKNVRPEYAWYNGTMDRYLKG 317 Caldithrix abyssi
Q2IE47       439 KTSWNWEQAGYKDcrypgapqaiVDACVTNpasaafgtskavidgvEVDYNWQKGVFVMEKDVKPAYRWYDGTARHATIS 518 Anaeromyxobacte...
WP_015404772 283 KMSWDWSKAATSKema----kekKVVKEHG----------------HAVYIFKKGQFTYESNVVPTYAWFNGTTSTYMIG 342 Desulfocapsa su...
Q74AQ3       291 KMSWDWSDVGkd----------iEAGEQFD----------------KETFMKHKGTFIWGKDVVPTYTWYNGTIERYLKG 344 Geobacter sulfu...
WP_012469248 292 KMMWNWSDVGkd----------iKAEEEFD----------------QETFAKRKGSFRWGKNVVPVYAWYNGKIERYMVG 345 Trichlorobacter...
WP_011985495 345 KVTWNWDLAGYKDckypgapaelVAACVGGaasiq-------vpegHLEYNWMKGTFLKQQNVKPVYRWYDGKAYHVTLK 417 Anaeromyxobacte...
WP_013036674 276 KMYWDWSQAGQDId--------pVPTDEYG----------------KATYNKKKGSFVWEKNVTPAYAWYNGSSDLYKLG 331 Methanohalophil...
1SP3_A       302 DKM-D--SN--V-----VTKLTYPMGDINDAKAKIYPFKVHTGKQIYDKKLNIFITPKTY--GK---------------- 353 Shewanella onei...
WP_014959717 492 DKV-D--INa------dVINLTEPVGSINDPNSKITPFKIMKGIQPVDADHDHIIIPHLFprNKdd-------------- 548 Desulfobacula t...
ACL03517     395 DKIdD--DG--------VTEITQPVGGIKDAKSRIAPFKIMAGKQPADKNNRTLLTPNLF--GP---------------- 446
WP_006930454 318 DKL-D--PA--N-----ILYLNRPRGSVYDNKAKIYPFKVMRGKQIYDAEYNYLIIPNLW-------------------- 367 Caldithrix abyssi
Q2IE47       519 GALaSfdPAdgQea-gaPIALSEPAARLGDAGARITPFKHMEGRQPVMIDGSFAIVPHVF--GQwslwglkpdpttagas 595 Anaeromyxobacte...
WP_015404772 343 DKI-D--PS--K-----TTILNAPQGDKNDPDAKIMPFKIHTGKQIYDAKFNYLITPKVW--GPkg-------------- 396 Desulfocapsa su...
Q74AQ3       345 QKIkD--PS--K-----VVNISRPLGDITDKKAKIFPFKVHTGKQPMDSLSNCLLIPQTH-------------------- 395 Geobacter sulfu...
WP_012469248 346 DKIkD--PS--K-----PVNITKPVGDIKDKTAKIYPYKYFTGTQPMDSKFKYLNTFQQY-------------------- 396 Trichlorobacter...
WP_011985495 418 DAV-D--PAa-GtpgnePLVLAEPTAAAT-AGAKIYPFKEMKGHQPVMADGSFVIAPHVFgpGGfwdgptip-------- 484 Anaeromyxobacte...
WP_013036674 332 DTI-N--AD--G-----MTVINAPVGSRDDADSQIYPFKIHRAKQISDAEYNYLIVPDLF--GGe--------------- 384 Methanohalophil...
1SP3_A       354 --------------------------GGYWSEFDWNLAAKLGMEAnptmleKGIK-----------------YSGEYDFA 390 Shewanella onei...
WP_014959717 549 -------------------------tTAYWKNLDWEKSFQDGMNA------VGLE-----------------YSGSYKWK 580 Desulfobacula t...
ACL03517     447 --------------------------KGYWKNVDWDQAFKIGAEA------TGIE-----------------YSGEYEWE 477
WP_006930454 368 --------------------------GGYWKHFNWDKAAKDGMAA------AGLP-----------------YSGHYAFV 398 Caldithrix abyssi
Q2IE47       596 ipvipatsaaptgprygdhatygaflDAMWNDVVSFGAATAGQVPalvtvaAGQAtrdvagdvtvnapghglASGSYNVM 675 Anaeromyxobacte...
WP_015404772 397 ------------------------dpDAFWVQFDWNKAAAAGMKV------SGLE-----------------YSGTFDFA 429 Desulfocapsa su...
Q74AQ3       396 --------------------------NALWKDYDWENALKKGAKG------SQVP-----------------YSGKYQFV 426 Geobacter sulfu...
WP_012469248 397 --------------------------KELWINFDWEKALVNGAKCt----dNCLP-----------------YSGKHQFV 429 Trichlorobacter...
WP_011985495 485 ------------------npvtaeqlQAIWNDVLTDGAIAAGQLQ------AGASl----------------TDADWKFA 524 Anaeromyxobacte...
WP_013036674 385 --------------------------nSYWATYDWDKAAASGMEY------VDMP-----------------YSGEYEFV 415 Methanohalophil...
1SP3_A       391 --------------------------------------------------------ATEMWWRINHMVSPKEQALN-CND 413 Shewanella onei...
WP_014959717 581 --------------------------------------------------------ETWMYWRLEHEVMPANMALS-CVQ 603 Desulfobacula t...
ACL03517     478 --------------------------------------------------------ETKMYWSLNHEVTPKEMALS-CVQ 500
WP_006930454 399 --------------------------------------------------------ETKMYWRINHEVVPKEKALQ-CVD 421 Caldithrix abyssi
Q2IE47       676 tpdagfapgikvvtavdantlrwheaalpapaapvvstqpvrlfralvrgvdwrwgSTEMFMNVNHEVAPKAQAISeCTD 755 Anaeromyxobacte...
WP_015404772 430 --------------------------------------------------------PTASYWPINHQVDPKEKALK-CLD 452 Desulfocapsa su...
Q74AQ3       427 --------------------------------------------------------KTAFYGSINHEVATRDKALQ-CGE 449 Geobacter sulfu...
WP_012469248 430 --------------------------------------------------------KTVSYIAAQHEVSPKEDALQ-CGE 452 Trichlorobacter...
WP_011985495 525 --------------------------------------------------------ATRMYMNINHEVAPKAEALV-CAD 547 Anaeromyxobacte...
WP_013036674 416 --------------------------------------------------------ETSLYESINHEVPPAEYSLE-CSD 438 Methanohalophil...
1SP3_A       414 CHNKG 418 Shewanella oneidensis MR-1
WP_014959717 604 CHESl 608 Desulfobacula toluolica
ACL03517     501 CHESl 505
WP_006930454 422 CHGKN 426 Caldithrix abyssi
Q2IE47       756 CHGPG 760 Anaeromyxobacter dehalogenans 2CP-C
WP_015404772 453 CHKSG 457 Desulfocapsa sulfexigens
Q74AQ3       450 CHMGG 454 Geobacter sulfurreducens
WP_012469248 453 CHMGG 457 Trichlorobacter lovleyi
WP_011985495 548 CHFGG 552 Anaeromyxobacter sp. Fw109-5
WP_013036674 439 CHLES 443 Methanohalophilus mahii
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