5N5Y


Conserved Protein Domain Family
Zn_ribbon_RRN7
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pfam11781: Zn_ribbon_RRN7 (This model is not part of the current CDD release)
Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
This is the zinc-finger at the start of transcription-binding factor that associates strongly with both Rrn6 and Rrn7 to form a complex which itself binds the TATA-binding protein and is required for transcription by the core domain of the RNA PolI promoter.
Links
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Statistics
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PSSM-Id: 519880
Aligned: 68 rows
Threshold Bit Score: 29.1239
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5N5Y_Q         4 FIRGPICGT--DNCpsrLWRI-IDGRRTCQYGHVMEG 37  brewer's yeast
XP_003855540  25 DHAVKVCPApnCGSt--EFTE-DDGLTICKHCYTQIN 58 
WP_012797511   1 MTLEIACEL--CGSn--QLTRnADGTYQCDRCGTKYT 33  Slackia heliotrinireducens
WP_012185942   3 SEGKWVCAV--CGSr--DVGLiIEGKLYCSKCGSKVI 35  Caldivirga maquilingensis
WP_011752402  10 AGPEPRCSV--CGSr--DVFAkIEGKYYCFKCGSRLV 42  Thermofilum pendens
XP_001579339  22 SEKAFQCPN--CQRy--KVTKrEDGTYICNHCNFIAD 54 
CDE53243      11 ENKPVECSK--CGAs--LFYK-GSGKYICNSCGNVEY 42 
Q5LP60        17 QEHRFPCAQ--CGAd-yRFNP-GAGTLVCDHCGHTEP 49  Ruegeria pomeroyi
Q1GFL5         8 ETHRFPCEQ--CGAd-yRFAP-AEGGLVCDHCGHKKE 40  Ruegeria sp. TM1040
WP_025313235  16 DEHRFPCPQ--CGSd-mRYAP-ADGKLVCDHCGHEEG 48  Roseicyclus elongatus
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